RNA id: TU163900



Basic Information


Item Value
RNA id TU163900
length 204
lncRNA type inter_gene
GC content 0.66
exon number 1
gene id G130777
representative True

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 25434916 ~ 25435119 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCCGCTCCTCCCTCAGTCTGCTggcctctctctccagctcacTCTCCCTGTCCGTGGCTTGTCGCAGGGAGTCCTGGTGCTGCGCCCTCTGGGACCTGAGTTCTGCCGCCTCCTGGGACACCGTCTTGAGCTCCTGGTGAAGGGAGAGGCTCTCGGATCCCAGCGCCTCCAGTCGGGAGCGCACACTAGCCAGCTGCATCTCCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU163898 lncRNA downstream 3249 25431443 ~ 25431667 (-) True G130775
TU163892 lncRNA downstream 13572 25421029 ~ 25421344 (-) True G130769
TU163882 lncRNA downstream 51622 25379918 ~ 25383294 (-) False G130764
TU163884 lncRNA downstream 51622 25379918 ~ 25383294 (-) True G130764
TU163854 lncRNA downstream 138064 25295379 ~ 25296852 (-) True G130739
TU163902 lncRNA upstream 2526 25437645 ~ 25440826 (-) True G130778
TU163905 lncRNA upstream 14137 25449256 ~ 25451074 (-) True G130781
TU164065 lncRNA upstream 690692 26125811 ~ 26132592 (-) True G130921
TU164092 lncRNA upstream 853429 26288548 ~ 26293255 (-) True G130944
TU164143 lncRNA upstream 1052074 26487193 ~ 26487686 (-) True G130980
AMCG00001327 mRNA downstream 154947 25275819 ~ 25279969 (-) True AMCG00001327
AMCG00001326 mRNA downstream 188266 25243645 ~ 25246650 (-) True AMCG00001326
AMCG00001323 mRNA downstream 211405 25219102 ~ 25223511 (-) True AMCG00001323
AMCG00001321 mRNA downstream 424301 24982581 ~ 25010615 (-) True AMCG00001321
AMCG00001320 mRNA downstream 569600 24806005 ~ 24865316 (-) True AMCG00001320
AMCG00001336 mRNA upstream 142569 25577688 ~ 25584557 (-) True AMCG00001336
AMCG00001341 mRNA upstream 240449 25675568 ~ 25707676 (-) True AMCG00001341
AMCG00001340 mRNA upstream 273732 25708851 ~ 25716069 (-) True AMCG00001340
AMCG00001339 mRNA upstream 292264 25727383 ~ 25734042 (-) True AMCG00001339
AMCG00001342 mRNA upstream 315223 25750342 ~ 25762406 (-) True AMCG00001342
TU163894 other downstream 11562 25421924 ~ 25423354 (-) True G130771
TU163889 other downstream 21069 25389227 ~ 25413847 (-) True G130767
TU163851 other downstream 157519 25275802 ~ 25277397 (-) False AMCG00001327
TU163843 other downstream 188464 25222896 ~ 25246452 (-) False G130735
TU163842 other downstream 209988 25222896 ~ 25224928 (-) True G130735
TU163903 other upstream 6494 25441613 ~ 25442631 (-) True G130779