RNA id: AMCG00001463



Basic Information


Item Value
RNA id AMCG00001463
length 273
RNA type mRNA
GC content 0.43
exon number 3
gene id AMCG00001463
representative True

Chromosome Information


Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 4770617 ~ 4779786 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tggaaAAACAGGAACCCCTCACTGGGAAACTACACAGATACACGAAAAGATCTCGTATTGATACTCAAAATGGAAAACGAAGTATTTACTCCTTTACTGGAGCAATTCATGCTGACCCCCTTGGTGACTTGgGTCAAGACGTTTGGGCCACTGGCTGGAAAAGACGAAATCCTAAAGCAACCGTTCaaagaacaaacaagaaagtgaaCAATGACACAACTCTCAGGATACAAAATCTGTCCATCCTCGTACGCCAGATGAAGTCCTATTACC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU198925 lncRNA upstream 56457 4713895 ~ 4714160 (+) True G157975
TU198915 lncRNA upstream 67756 4696554 ~ 4702861 (+) True G157966
TU198914 lncRNA upstream 118617 4635364 ~ 4652000 (+) False AMCG00001457
TU198757 lncRNA upstream 702990 4067088 ~ 4067627 (+) True G157834
TU198740 lncRNA upstream 747369 4022797 ~ 4023248 (+) False AMCG00001433
TU198941 lncRNA downstream 92909 4872695 ~ 4875144 (+) True G157985
TU198946 lncRNA downstream 92909 4872695 ~ 4875144 (+) False G157985
TU198982 lncRNA downstream 108328 4888114 ~ 4888352 (+) True G158014
TU199069 lncRNA downstream 533282 5313068 ~ 5315236 (+) True G158089
TU199073 lncRNA downstream 586219 5366005 ~ 5367069 (+) False AMCG00001480
AMCG00001457 mRNA upstream 118670 4623467 ~ 4651947 (+) True AMCG00001457
AMCG00001452 mRNA upstream 251489 4518304 ~ 4519128 (+) True AMCG00001452
AMCG00001453 mRNA upstream 252704 4512184 ~ 4517913 (+) True AMCG00001453
AMCG00001450 mRNA upstream 259761 4500349 ~ 4510856 (+) True AMCG00001450
AMCG00001451 mRNA upstream 274766 4489453 ~ 4495851 (+) True AMCG00001451
AMCG00001461 mRNA downstream 22386 4802172 ~ 4866884 (+) True AMCG00001461
AMCG00001462 mRNA downstream 89293 4869079 ~ 4870742 (+) True AMCG00001462
AMCG00001459 mRNA downstream 96362 4876148 ~ 4885603 (+) True AMCG00001459
AMCG00001460 mRNA downstream 135065 4914851 ~ 4939823 (+) True AMCG00001460
AMCG00001470 mRNA downstream 469588 5249374 ~ 5250444 (+) True AMCG00001470
TU198750 other upstream 708327 4052997 ~ 4062290 (+) False AMCG00001430
TU198688 other upstream 889838 3875209 ~ 3880779 (+) True G157781
TU198685 other upstream 894344 3875209 ~ 3876273 (+) False G157781
TU198192 other upstream 2769689 1971881 ~ 2000928 (+) True G157369
TU197970 other upstream 4181317 587975 ~ 589300 (+) True G157196
TU199079 other downstream 601904 5381690 ~ 5383064 (+) True AMCG00001480
TU199165 other downstream 817471 5597257 ~ 5622676 (+) True AMCG00001486
TU199229 other downstream 1090933 5870719 ~ 5871150 (+) False AMCG00001489
TU199235 other downstream 1118449 5898235 ~ 5900998 (+) True AMCG00001493
TU199345 other downstream 1614317 6394103 ~ 6395960 (+) True AMCG00001509

Expression Profile