Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00001475 |
| length | 1174 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 7 |
| gene id | AMCG00001475 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030143.1 |
| NCBI id | CM030143.1 |
| chromosome length | 20516281 |
| location | 5481284 ~ 5486455 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0042221 | response to chemical | biological_process |
| GO:0008146 | sulfotransferase activity | molecular_function |
| id | description |
|---|---|
| K22523 | SULT6B1; sulfotransferase 6B1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU199086 | lncRNA | upstream | 58192 | 5421471 ~ 5423092 (+) | True | G158104 |
| TU199073 | lncRNA | upstream | 114215 | 5366005 ~ 5367069 (+) | False | AMCG00001480 |
| TU199069 | lncRNA | upstream | 166048 | 5313068 ~ 5315236 (+) | True | G158089 |
| TU198982 | lncRNA | upstream | 592932 | 4888114 ~ 4888352 (+) | True | G158014 |
| TU198946 | lncRNA | upstream | 606140 | 4872695 ~ 4875144 (+) | False | G157985 |
| TU199168 | lncRNA | downstream | 107225 | 5593680 ~ 5622676 (+) | False | AMCG00001486 |
| TU199182 | lncRNA | downstream | 221637 | 5708092 ~ 5734559 (+) | True | G158184 |
| TU199234 | lncRNA | downstream | 405591 | 5892046 ~ 5892246 (+) | True | G158230 |
| TU199346 | lncRNA | downstream | 910465 | 6396920 ~ 6398188 (+) | True | G158332 |
| TU199355 | lncRNA | downstream | 922566 | 6409021 ~ 6410557 (+) | True | G158337 |
| AMCG00001478 | mRNA | upstream | 12346 | 5465896 ~ 5468938 (+) | True | AMCG00001478 |
| AMCG00001479 | mRNA | upstream | 67748 | 5403225 ~ 5413536 (+) | True | AMCG00001479 |
| AMCG00001480 | mRNA | upstream | 98700 | 5367032 ~ 5382584 (+) | False | AMCG00001480 |
| AMCG00001470 | mRNA | upstream | 230840 | 5249374 ~ 5250444 (+) | True | AMCG00001470 |
| AMCG00001460 | mRNA | upstream | 541461 | 4914851 ~ 4939823 (+) | True | AMCG00001460 |
| AMCG00001476 | mRNA | downstream | 4871 | 5491326 ~ 5502268 (+) | True | AMCG00001476 |
| AMCG00001477 | mRNA | downstream | 50881 | 5537336 ~ 5557467 (+) | True | AMCG00001477 |
| AMCG00001486 | mRNA | downstream | 111168 | 5597623 ~ 5633349 (+) | False | AMCG00001486 |
| AMCG00001488 | mRNA | downstream | 333151 | 5819606 ~ 5826495 (+) | True | AMCG00001488 |
| AMCG00001489 | mRNA | downstream | 383520 | 5869975 ~ 5871430 (+) | True | AMCG00001489 |
| TU199079 | other | upstream | 98220 | 5381690 ~ 5383064 (+) | True | AMCG00001480 |
| TU198750 | other | upstream | 1418994 | 4052997 ~ 4062290 (+) | False | AMCG00001430 |
| TU198688 | other | upstream | 1600505 | 3875209 ~ 3880779 (+) | True | G157781 |
| TU198685 | other | upstream | 1605011 | 3875209 ~ 3876273 (+) | False | G157781 |
| TU198192 | other | upstream | 3480356 | 1971881 ~ 2000928 (+) | True | G157369 |
| TU199165 | other | downstream | 110802 | 5597257 ~ 5622676 (+) | True | AMCG00001486 |
| TU199229 | other | downstream | 384264 | 5870719 ~ 5871150 (+) | False | AMCG00001489 |
| TU199235 | other | downstream | 411780 | 5898235 ~ 5900998 (+) | True | AMCG00001493 |
| TU199345 | other | downstream | 907648 | 6394103 ~ 6395960 (+) | True | AMCG00001509 |
| TU199525 | other | downstream | 1388313 | 6874768 ~ 6876578 (+) | True | G158478 |
