Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00001641 |
| length | 489 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 4 |
| gene id | AMCG00001641 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030143.1 |
| NCBI id | CM030143.1 |
| chromosome length | 20516281 |
| location | 10199198 ~ 10201935 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0005509 | calcium ion binding | molecular_function |
| id | description |
|---|---|
| K06268 | PPP3R, CNB; serine/threonine-protein phosphatase 2B regulatory subunit |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU200444 | lncRNA | upstream | 39380 | 10157734 ~ 10159818 (+) | False | AMCG00001630 |
| TU200427 | lncRNA | upstream | 128864 | 10069930 ~ 10070334 (+) | True | G159204 |
| TU200388 | lncRNA | upstream | 329595 | 9869168 ~ 9869603 (+) | True | G159169 |
| TU200389 | lncRNA | upstream | 335970 | 9862960 ~ 9863228 (+) | True | G159170 |
| TU200359 | lncRNA | upstream | 829288 | 9316111 ~ 9369910 (+) | True | G159142 |
| TU200477 | lncRNA | downstream | 113126 | 10315061 ~ 10319144 (+) | True | G159250 |
| TU200504 | lncRNA | downstream | 240012 | 10441947 ~ 10448746 (+) | True | G159273 |
| TU200526 | lncRNA | downstream | 467241 | 10669176 ~ 10677854 (+) | False | AMCG00001643 |
| TU200532 | lncRNA | downstream | 482847 | 10684782 ~ 10687436 (+) | True | G159294 |
| TU200579 | lncRNA | downstream | 545554 | 10747489 ~ 10757822 (+) | False | AMCG00001645 |
| AMCG00001632 | mRNA | upstream | 21300 | 10174132 ~ 10177898 (+) | True | AMCG00001632 |
| AMCG00001630 | mRNA | upstream | 39372 | 10157745 ~ 10159826 (+) | True | AMCG00001630 |
| AMCG00001631 | mRNA | upstream | 101395 | 10095360 ~ 10097803 (+) | True | AMCG00001631 |
| AMCG00001633 | mRNA | upstream | 148504 | 10014223 ~ 10050694 (+) | True | AMCG00001633 |
| AMCG00001635 | mRNA | upstream | 226218 | 9971353 ~ 9972980 (+) | True | AMCG00001635 |
| AMCG00001640 | mRNA | downstream | 6841 | 10208776 ~ 10212074 (+) | True | AMCG00001640 |
| AMCG00001639 | mRNA | downstream | 20630 | 10222565 ~ 10226082 (+) | True | AMCG00001639 |
| AMCG00001643 | mRNA | downstream | 453252 | 10655187 ~ 10669909 (+) | True | AMCG00001643 |
| AMCG00001646 | mRNA | downstream | 493031 | 10694966 ~ 10705277 (+) | True | AMCG00001646 |
| AMCG00001644 | mRNA | downstream | 507938 | 10709873 ~ 10717682 (+) | True | AMCG00001644 |
| TU200393 | other | upstream | 284534 | 9913308 ~ 9914664 (+) | True | G159174 |
| TU199983 | other | upstream | 2037383 | 8159146 ~ 8161815 (+) | True | G158836 |
| TU199853 | other | upstream | 2265643 | 7933156 ~ 7933555 (+) | True | G158725 |
| TU199783 | other | upstream | 2452218 | 7746681 ~ 7746980 (+) | True | G158676 |
| TU199779 | other | upstream | 2461308 | 7736515 ~ 7737890 (+) | True | G158672 |
| TU201065 | other | downstream | 2128053 | 12329988 ~ 12331448 (+) | True | AMCG00001691 |
| TU201467 | other | downstream | 4067680 | 14269615 ~ 14270190 (+) | True | G160026 |
| TU201667 | other | downstream | 5129685 | 15331620 ~ 15334567 (+) | False | AMCG00001760 |
| TU201717 | other | downstream | 5230402 | 15432337 ~ 15439031 (+) | True | AMCG00001762 |
| TU202121 | other | downstream | 6035327 | 16237262 ~ 16295506 (+) | False | AMCG00001814 |
