Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00001709 |
| length | 702 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 6 |
| gene id | AMCG00001709 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030143.1 |
| NCBI id | CM030143.1 |
| chromosome length | 20516281 |
| location | 13141097 ~ 13150256 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| K14617 | LMBRD1; LMBR1 domain-containing protein 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU201183 | lncRNA | upstream | 264411 | 12785795 ~ 12876686 (+) | True | G159798 |
| TU201187 | lncRNA | upstream | 330362 | 12799509 ~ 12810735 (+) | True | G159800 |
| TU201143 | lncRNA | upstream | 461608 | 12676811 ~ 12679489 (+) | True | G159775 |
| TU200938 | lncRNA | upstream | 1493645 | 11625671 ~ 11647452 (+) | True | G159594 |
| TU200801 | lncRNA | upstream | 1701485 | 11436662 ~ 11439612 (+) | True | G159483 |
| TU201465 | lncRNA | downstream | 1117132 | 14267388 ~ 14267722 (+) | True | G160024 |
| TU201478 | lncRNA | downstream | 1155769 | 14306025 ~ 14306260 (+) | True | G160036 |
| TU201556 | lncRNA | downstream | 1375481 | 14525737 ~ 14526508 (+) | True | G160107 |
| TU201569 | lncRNA | downstream | 1408510 | 14558766 ~ 14563369 (+) | False | G160116 |
| TU201568 | lncRNA | downstream | 1412598 | 14562854 ~ 14563369 (+) | True | G160116 |
| AMCG00001708 | mRNA | upstream | 129308 | 12984899 ~ 13011789 (+) | True | AMCG00001708 |
| AMCG00001699 | mRNA | upstream | 288374 | 12844164 ~ 12852723 (+) | True | AMCG00001699 |
| AMCG00001698 | mRNA | upstream | 348266 | 12787082 ~ 12792831 (+) | True | AMCG00001698 |
| AMCG00001695 | mRNA | upstream | 614702 | 12521489 ~ 12526395 (+) | True | AMCG00001695 |
| AMCG00001689 | mRNA | upstream | 620392 | 12517012 ~ 12520705 (+) | True | AMCG00001689 |
| AMCG00001718 | mRNA | downstream | 441935 | 13592191 ~ 13602628 (+) | True | AMCG00001718 |
| AMCG00001717 | mRNA | downstream | 468038 | 13618294 ~ 13661682 (+) | True | AMCG00001717 |
| AMCG00001723 | mRNA | downstream | 511525 | 13661781 ~ 13667350 (+) | True | AMCG00001723 |
| AMCG00001719 | mRNA | downstream | 522325 | 13672581 ~ 13674756 (+) | True | AMCG00001719 |
| AMCG00001720 | mRNA | downstream | 546500 | 13696756 ~ 13702729 (+) | True | AMCG00001720 |
| TU201065 | other | upstream | 809649 | 12329988 ~ 12331448 (+) | True | AMCG00001691 |
| TU200393 | other | upstream | 3226433 | 9913308 ~ 9914664 (+) | True | G159174 |
| TU199983 | other | upstream | 4979282 | 8159146 ~ 8161815 (+) | True | G158836 |
| TU199853 | other | upstream | 5207542 | 7933156 ~ 7933555 (+) | True | G158725 |
| TU199783 | other | upstream | 5394117 | 7746681 ~ 7746980 (+) | True | G158676 |
| TU201467 | other | downstream | 1119359 | 14269615 ~ 14270190 (+) | True | G160026 |
| TU201667 | other | downstream | 2181364 | 15331620 ~ 15334567 (+) | False | AMCG00001760 |
| TU201717 | other | downstream | 2282081 | 15432337 ~ 15439031 (+) | True | AMCG00001762 |
| TU202121 | other | downstream | 3087006 | 16237262 ~ 16295506 (+) | False | AMCG00001814 |
| TU202141 | other | downstream | 3219157 | 16369413 ~ 16372304 (+) | False | AMCG00001814 |
