RNA id: AMCG00001762



Basic Information


Item Value
RNA id AMCG00001762
length 417
RNA type mRNA
GC content 0.51
exon number 3
gene id AMCG00001762
representative False

Chromosome Information


Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 15432337 ~ 15439031 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGGGGTTGCTGACGGGCTACTGCTCCTCACCGCTCTGGTTTGCATCGCTTCTTCTCAGGagTTTTTATACACCCATGATGGGGCCAAGCCTTTGAAACCTGGATCCACCACGGACGTCAGCAAGAACGACCCGGGTGTTCAAAAGGCAGTGAAGACTGCAACCTACTACTTCAACAACAGATCCAACGACATATTTGTGTTCAGGGCATCCTCCATAGATGATGCAAAGAAACAGGTGGTAAAAGGTGTCAAATACATCCTGGAAGTGGAGATCTCCCGCACAGTTTGTCGCAAGAGAGGACATCCCGATCCGGACAACTGTGACTTCCAACCCAATGGGATTCTGAAGCAGGCAAGTCTCGTCCGCAGTGACAAGCATCTCCCACAAACCACAGACAAACCCGTGACCCGCTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU201689 lncRNA upstream 14813 15402285 ~ 15417554 (+) True G160200
TU201668 lncRNA upstream 97800 15331620 ~ 15334567 (+) True AMCG00001760
TU201615 lncRNA upstream 730911 14701134 ~ 14701456 (+) True G160144
TU201590 lncRNA upstream 799877 14629303 ~ 14632490 (+) True G160129
TU201569 lncRNA upstream 868998 14558766 ~ 14563369 (+) False G160116
TU201919 lncRNA downstream 394551 15828776 ~ 15829766 (+) True G160375
TU202021 lncRNA downstream 680119 16114344 ~ 16114699 (+) True G160463
TU202022 lncRNA downstream 682980 16117205 ~ 16119266 (+) True G160464
TU202122 lncRNA downstream 842581 16276806 ~ 16278054 (+) True G160542
TU202247 lncRNA downstream 1465670 16899895 ~ 16902440 (+) True G160648
AMCG00001761 mRNA upstream 39691 15388046 ~ 15392676 (+) True AMCG00001761
AMCG00001760 mRNA upstream 97787 15331707 ~ 15334580 (+) False AMCG00001760
AMCG00001759 mRNA upstream 106629 15285864 ~ 15325738 (+) True AMCG00001759
AMCG00001758 mRNA upstream 166183 15264098 ~ 15266184 (+) True AMCG00001758
AMCG00001766 mRNA upstream 314182 15016232 ~ 15118185 (+) True AMCG00001766
AMCG00001770 mRNA downstream 59022 15493247 ~ 15501705 (+) True AMCG00001770
AMCG00001769 mRNA downstream 67845 15502070 ~ 15525306 (+) True AMCG00001769
AMCG00001768 mRNA downstream 115366 15549591 ~ 15552415 (+) True AMCG00001768
AMCG00001776 mRNA downstream 143950 15578175 ~ 15610687 (+) True AMCG00001776
AMCG00001775 mRNA downstream 178787 15613012 ~ 15619118 (+) True AMCG00001775
TU201667 other upstream 97800 15331620 ~ 15334567 (+) False AMCG00001760
TU201467 other upstream 1162177 14269615 ~ 14270190 (+) True G160026
TU201065 other upstream 3100919 12329988 ~ 12331448 (+) True AMCG00001691
TU200393 other upstream 5517703 9913308 ~ 9914664 (+) True G159174
TU199983 other upstream 7270552 8159146 ~ 8161815 (+) True G158836
TU202121 other downstream 803037 16237262 ~ 16295506 (+) False AMCG00001814
TU202141 other downstream 935188 16369413 ~ 16372304 (+) False AMCG00001814
TU202413 other downstream 1983126 17417351 ~ 17462934 (+) True AMCG00001846
TU202633 other downstream 2753677 18187902 ~ 18200855 (+) False AMCG00001881
TU202641 other downstream 2782350 18216575 ~ 18217138 (+) False AMCG00001883

Expression Profile