RNA id: AMCG00001810


Basic Information

Item Value
RNA id AMCG00001810
length 444
RNA type mRNA
GC content 0.51
exon number 3
gene id AMCG00001810
representative True

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 16146837 ~ 16148575 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCCTCCTTCTGACAGAATACGGCAGccTGAAGACAATGGGAGCTTTTTATCAGAAACAACACAAGACTTCTTCAAAAGATTCGAGAGCTCCTGCGAGAGTTGCTATTGCTCGGTCCCCCCACCCAAGATCAGCGACCTCATGAACGACGAAGACTTGCTGTACTTCCTGCGACTAAAGCTGGACCCCAACTACTCGACCATCAAGAACTGGAAGAACTTTGCCAGCAAGTGGGGCATGACTTACGACGAACTGAATTTCCTGGAGCACCGGACTCAGGGCTCCACCCACAGCCCCACCCAGGAGTTCTTGCAACGAAACAACGAGAAGACGGTCAAGGAGCTGACCGACCTGTGCATCACATACCAGAGGATCGACGTCCTCCGAAAACTACAGAAGTGGGTGGAGAAAGACTGGCCAAAACGATGGCAAAAAGCACATTAA

Function

GO: NA

KEGG:

id description
K23324 EDARADD; ectodysplasin-A receptor-associated adapter protein

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU201925 lncRNA downstream 317076 15828758 ~ 15829761 (-) False AMCG00001791
TU201932 lncRNA downstream 350479 15791996 ~ 15796358 (-) True G160387
TU201877 lncRNA downstream 454223 15691569 ~ 15692614 (-) False AMCG00001784
TU201842 lncRNA downstream 536121 15603843 ~ 15610716 (-) True G160319
TU201830 lncRNA downstream 551482 15594607 ~ 15595355 (-) True G160311
TU202118 lncRNA upstream 85840 16234415 ~ 16235803 (-) True G160538
TU202128 lncRNA upstream 166752 16315327 ~ 16315563 (-) True G160548
TU202225 lncRNA upstream 668364 16816939 ~ 16817195 (-) True G160631
TU202234 lncRNA upstream 706078 16854653 ~ 16854957 (-) True G160640
TU202283 lncRNA upstream 826873 16975448 ~ 16975879 (-) True G160682
AMCG00001808 mRNA downstream 26501 16115193 ~ 16120336 (-) True AMCG00001808
AMCG00001809 mRNA downstream 32724 16066284 ~ 16114113 (-) True AMCG00001809
AMCG00001798 mRNA downstream 101180 16030594 ~ 16045657 (-) True AMCG00001798
AMCG00001796 mRNA downstream 121434 16018913 ~ 16025403 (-) True AMCG00001796
AMCG00001795 mRNA downstream 155579 15967103 ~ 15991258 (-) True AMCG00001795
AMCG00001803 mRNA upstream 19288 16167863 ~ 16170455 (-) True AMCG00001803
AMCG00001801 mRNA upstream 22666 16171241 ~ 16176554 (-) True AMCG00001801
AMCG00001802 mRNA upstream 28610 16177185 ~ 16197496 (-) True AMCG00001802
AMCG00001804 mRNA upstream 124753 16273328 ~ 16279392 (-) True AMCG00001804
AMCG00001816 mRNA upstream 486889 16635464 ~ 16644981 (-) True AMCG00001816
TU201878 other downstream 444337 15693674 ~ 15702500 (-) False AMCG00001784
TU201759 other downstream 626198 15504311 ~ 15520639 (-) True G160255
TU201753 other downstream 645069 15499553 ~ 15501768 (-) True AMCG00001771
TU202328 other upstream 942843 17091418 ~ 17092449 (-) False AMCG00001843
TU202450 other upstream 1382291 17530866 ~ 17531990 (-) True G160817
TU202549 other upstream 1711564 17860139 ~ 17865318 (-) False AMCG00001863
TU202574 other upstream 1760179 17908754 ~ 17910853 (-) True G160925
TU202858 other upstream 2687207 18835782 ~ 18850884 (-) True G161153

Expression Profile