RNA id: AMCG00001829



Basic Information


Item Value
RNA id AMCG00001829
length 411
RNA type mRNA
GC content 0.55
exon number 1
gene id AMCG00001829
representative True

Chromosome Information


Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 16797565 ~ 16797975 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCTGCCTGTCTGGCTTGACCTGCCTCTGGACCAGCCATTTGACATTGAGAGGACGCACAGATCCTCAGGACAGAGACCAGGAGCTAACCAGAGACCGAGGAGCATCGTGGTTCGCTTTCTGAGAGACCTTGACAAGGAGGCTATCCTGAATGCTTTCAGAATTGAACGTGAGGTACTACACAAGGGCTCAAGGCTGCCGTGTTTCAAGGCCTGTCCGCGGAGGTGCCGCGCAAGAGGAGAGATCTGGCAGCGGAGAGGAGAAAGCTCACCGGTCTTGGGGTTTTCAGGGGCTTGGCCTGTCCAGCTAAACTTCAAATTCTGGACAAGGGGAGGATTAGAGTTTGAAACATCAGCCACGGCCACCGAGTTCCTGGGAGTTGGAAAGCCGTCCTGTGGATCCCCCAAGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU202128 lncRNA downstream 482002 16315327 ~ 16315563 (-) True G160548
TU202118 lncRNA downstream 561762 16234415 ~ 16235803 (-) True G160538
TU201925 lncRNA downstream 967804 15828758 ~ 15829761 (-) False AMCG00001791
TU201932 lncRNA downstream 1001207 15791996 ~ 15796358 (-) True G160387
TU201877 lncRNA downstream 1104951 15691569 ~ 15692614 (-) False AMCG00001784
TU202225 lncRNA upstream 18964 16816939 ~ 16817195 (-) True G160631
TU202234 lncRNA upstream 56678 16854653 ~ 16854957 (-) True G160640
TU202283 lncRNA upstream 177473 16975448 ~ 16975879 (-) True G160682
TU202404 lncRNA upstream 610236 17408211 ~ 17408617 (-) True G160783
TU202475 lncRNA upstream 804106 17602081 ~ 17604562 (-) True G160842
AMCG00001826 mRNA downstream 18992 16772176 ~ 16778573 (-) True AMCG00001826
AMCG00001827 mRNA downstream 64990 16724475 ~ 16732575 (-) True AMCG00001827
AMCG00001817 mRNA downstream 118936 16645927 ~ 16678629 (-) True AMCG00001817
AMCG00001816 mRNA downstream 152584 16635464 ~ 16644981 (-) True AMCG00001816
AMCG00001804 mRNA downstream 518173 16273328 ~ 16279392 (-) True AMCG00001804
AMCG00001828 mRNA upstream 41419 16839394 ~ 16840260 (-) True AMCG00001828
AMCG00001822 mRNA upstream 101985 16899960 ~ 16905437 (-) True AMCG00001822
AMCG00001823 mRNA upstream 153546 16951521 ~ 16959906 (-) True AMCG00001823
AMCG00001821 mRNA upstream 162490 16960465 ~ 16968616 (-) True AMCG00001821
AMCG00001832 mRNA upstream 179348 16977323 ~ 16990978 (-) True AMCG00001832
TU201878 other downstream 1095065 15693674 ~ 15702500 (-) False AMCG00001784
TU201759 other downstream 1276926 15504311 ~ 15520639 (-) True G160255
TU201753 other downstream 1295797 15499553 ~ 15501768 (-) True AMCG00001771
TU202328 other upstream 293443 17091418 ~ 17092449 (-) False AMCG00001843
TU202450 other upstream 732891 17530866 ~ 17531990 (-) True G160817
TU202549 other upstream 1062164 17860139 ~ 17865318 (-) False AMCG00001863
TU202574 other upstream 1110779 17908754 ~ 17910853 (-) True G160925
TU202858 other upstream 2037807 18835782 ~ 18850884 (-) True G161153