RNA id: AMCG00001905


Basic Information

Item Value
RNA id AMCG00001905
length 228
RNA type mRNA
GC content 0.70
exon number 1
gene id AMCG00001905
representative True

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 19054745 ~ 19054972 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCTGCCAGGCTACCGGGCGCTGCTCCAGCAGGACTGTGTGACGCGACCCGTGGGGAGGAAGCGCCGATGCGGGGAGACGCGCCAGGCAGACGGCCTCCGAGCCCCGACGCAGGGCTCGCTGTGTGCCCCTCCAGAGGCGCCTCCGAGCCGGGGGACGCTGTGATCCGAGCCCGCTGTCGTGGGGCTCTGGAGTCTGCTGTGGGTCTTCACCGCGTTTGCGAATAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU202874 lncRNA downstream 153027 18899147 ~ 18901718 (-) True G161165
TU202869 lncRNA downstream 167177 18886294 ~ 18887568 (-) True G161161
TU202859 lncRNA downstream 203861 18842976 ~ 18850884 (-) False G161153
TU202707 lncRNA downstream 708723 18262244 ~ 18346022 (-) True G161030
TU202931 lncRNA upstream 29140 19084112 ~ 19084976 (-) True G161206
TU203051 lncRNA upstream 400152 19455124 ~ 19457742 (-) True G161302
TU203098 lncRNA upstream 1037141 20092113 ~ 20093345 (-) True G161346
TU203157 lncRNA upstream 1170685 20225657 ~ 20225919 (-) True G161391
TU203216 lncRNA upstream 1285453 20340425 ~ 20345341 (-) True AMCG00001945
AMCG00001906 mRNA downstream 120 19054329 ~ 19054625 (-) True AMCG00001906
AMCG00001904 mRNA downstream 500 19053730 ~ 19054245 (-) True AMCG00001904
AMCG00001903 mRNA downstream 2434 19050302 ~ 19052311 (-) True AMCG00001903
AMCG00001902 mRNA downstream 11898 19040453 ~ 19042847 (-) True AMCG00001902
AMCG00001891 mRNA downstream 75452 18975031 ~ 18979293 (-) True AMCG00001891
AMCG00001901 mRNA upstream 9548 19064520 ~ 19078157 (-) True AMCG00001901
AMCG00001911 mRNA upstream 59791 19114763 ~ 19115644 (-) True AMCG00001911
AMCG00001912 mRNA upstream 72290 19127262 ~ 19131079 (-) True AMCG00001912
AMCG00001910 mRNA upstream 122293 19177265 ~ 19186120 (-) True AMCG00001910
AMCG00001914 mRNA upstream 232306 19287278 ~ 19299869 (-) True AMCG00001914
TU202858 other downstream 203861 18835782 ~ 18850884 (-) True G161153
TU202574 other downstream 1143892 17908754 ~ 17910853 (-) True G160925
TU202549 other downstream 1189427 17860139 ~ 17865318 (-) False AMCG00001863
TU202450 other downstream 1522755 17530866 ~ 17531990 (-) True G160817
TU202328 other downstream 1962296 17091418 ~ 17092449 (-) False AMCG00001843

Expression Profile