RNA id: AMCG00001912


Basic Information

Item Value
RNA id AMCG00001912
length 495
RNA type mRNA
GC content 0.63
exon number 2
gene id AMCG00001912
representative True

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 19127262 ~ 19131079 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGATGCCCGGCCGGCGGGTGCGAGGATGCCGCTCCCCGCTGCACATCAACGAGGACACCGGGCGCTTCCTGCTGCTGGCGCTGCTCATCGCGCTGTACCTGCTGTGCGGCGCCGCCGTCTTCTCCGCCGTCGAGAGACCCTCCGAGCTGGCAGCGCAGCGCCGCTGGAACCGGACCCTGTCCAACTTCAGCGACACCTTCAACATCAGCCTGCGGGAGCTGAGCGCTTTCCTGCGGGACTATGAGGCGGCGATCGCGGCCGGGATCAGGGCGGATCCCCAGAGACCACGATGGGACTTCACGGGGGCTTTCTACTTTGTCGGGACAGTGGTGTCCACTATTGGGACGATCAGACATTCTTTGGAGTTGCGGGGCGGGCAGCTCTTTGTCTACAGATGTCCACCCACCGTAATCACAACAGATGTGGCCCTGAAAGGACGCAGTTTCCTCGCCTCACTGCGCCCCGAGATCGCCAGCCTGCTCTGCTATTCCTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU202931 lncRNA downstream 42286 19084112 ~ 19084976 (-) True G161206
TU202874 lncRNA downstream 225544 18899147 ~ 18901718 (-) True G161165
TU202869 lncRNA downstream 239694 18886294 ~ 18887568 (-) True G161161
TU202859 lncRNA downstream 276378 18842976 ~ 18850884 (-) False G161153
TU202718 lncRNA downstream 823164 18301084 ~ 18304098 (-) True G161039
TU203051 lncRNA upstream 324045 19455124 ~ 19457742 (-) True G161302
TU203098 lncRNA upstream 961034 20092113 ~ 20093345 (-) True G161346
TU203157 lncRNA upstream 1094578 20225657 ~ 20225919 (-) True G161391
TU203216 lncRNA upstream 1209346 20340425 ~ 20345341 (-) True AMCG00001945
TU203248 lncRNA upstream 1307389 20438468 ~ 20438673 (-) True G161475
AMCG00001911 mRNA downstream 11618 19114763 ~ 19115644 (-) True AMCG00001911
AMCG00001901 mRNA downstream 49105 19064520 ~ 19078157 (-) True AMCG00001901
AMCG00001905 mRNA downstream 72290 19054745 ~ 19054972 (-) True AMCG00001905
AMCG00001906 mRNA downstream 72637 19054329 ~ 19054625 (-) True AMCG00001906
AMCG00001904 mRNA downstream 73017 19053730 ~ 19054245 (-) True AMCG00001904
AMCG00001910 mRNA upstream 46186 19177265 ~ 19186120 (-) True AMCG00001910
AMCG00001914 mRNA upstream 156199 19287278 ~ 19299869 (-) True AMCG00001914
AMCG00001913 mRNA upstream 179959 19311038 ~ 19323661 (-) True AMCG00001913
AMCG00001916 mRNA upstream 328201 19459280 ~ 19460843 (-) True AMCG00001916
AMCG00001917 mRNA upstream 376918 19507997 ~ 19511624 (-) True AMCG00001917
TU202858 other downstream 276378 18835782 ~ 18850884 (-) True G161153
TU202574 other downstream 1216409 17908754 ~ 17910853 (-) True G160925
TU202549 other downstream 1261944 17860139 ~ 17865318 (-) False AMCG00001863
TU202450 other downstream 1595272 17530866 ~ 17531990 (-) True G160817
TU202328 other downstream 2034813 17091418 ~ 17092449 (-) False AMCG00001843

Expression Profile