RNA id: AMCG00001918


Basic Information

Item Value
RNA id AMCG00001918
length 486
RNA type mRNA
GC content 0.56
exon number 3
gene id AMCG00001918
representative True

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 19515581 ~ 19519632 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GAAAAGGGGAATATTGGAGTTGTATTTAATGTTGGAACAGATGACATAACTATCGAAGAGACAACAAAGTTTGTAAATGATGGAAAATACCACATAGTACGGTTCACTCGCAGTGGGGGCAACGCCACGCTGCAGGTGGATGACCTACCAGTCATTGAGCGATACCCCACAGCGCCCCCATCCTTCCTCACGCTGAATATAAAAGCAGCGCCCAGAACCAACTCCCACACACTGTCCTCCTCTCACTGCGTCTCCAGCGCTCGGGAGACATCTGAACTGCAGCACACTGGACTCTTCCGAATTGCCGCTGTGGTGCTGACGAGAACCCAGGAAGGAGACGGAGATGGGGGGGGTGTTTTCTTCATATCGGCCCCAGTCTGTCAGTCCGCCTTCCTGTTCAGCACCCGCCGGCGACAGCGTCCCGCCCCGCCCGAGCGGCCGGTCAATAGGGCCCCTGCTGGATTGCAGAGACTCTCCGGTCGGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU203051 lncRNA downstream 57839 19455124 ~ 19457742 (-) True G161302
TU202931 lncRNA downstream 430605 19084112 ~ 19084976 (-) True G161206
TU202874 lncRNA downstream 613863 18899147 ~ 18901718 (-) True G161165
TU202869 lncRNA downstream 628013 18886294 ~ 18887568 (-) True G161161
TU202859 lncRNA downstream 664697 18842976 ~ 18850884 (-) False G161153
TU203098 lncRNA upstream 572481 20092113 ~ 20093345 (-) True G161346
TU203157 lncRNA upstream 706025 20225657 ~ 20225919 (-) True G161391
TU203216 lncRNA upstream 820793 20340425 ~ 20345341 (-) True AMCG00001945
TU203248 lncRNA upstream 918836 20438468 ~ 20438673 (-) True G161475
TU203244 lncRNA upstream 956296 20475928 ~ 20478231 (-) True G161471
AMCG00001917 mRNA downstream 3957 19507997 ~ 19511624 (-) True AMCG00001917
AMCG00001916 mRNA downstream 54738 19459280 ~ 19460843 (-) True AMCG00001916
AMCG00001913 mRNA downstream 191920 19311038 ~ 19323661 (-) True AMCG00001913
AMCG00001914 mRNA downstream 215712 19287278 ~ 19299869 (-) True AMCG00001914
AMCG00001910 mRNA downstream 329461 19177265 ~ 19186120 (-) True AMCG00001910
AMCG00001919 mRNA upstream 52567 19572199 ~ 19573651 (-) True AMCG00001919
AMCG00001927 mRNA upstream 101754 19621386 ~ 19634914 (-) True AMCG00001927
AMCG00001928 mRNA upstream 128120 19647752 ~ 19667440 (-) True AMCG00001928
AMCG00001929 mRNA upstream 156716 19676348 ~ 19677155 (-) True AMCG00001929
AMCG00001925 mRNA upstream 252447 19772079 ~ 19772822 (-) True AMCG00001925
TU202858 other downstream 664697 18835782 ~ 18850884 (-) True G161153
TU202574 other downstream 1604728 17908754 ~ 17910853 (-) True G160925
TU202549 other downstream 1650263 17860139 ~ 17865318 (-) False AMCG00001863
TU202450 other downstream 1983591 17530866 ~ 17531990 (-) True G160817
TU202328 other downstream 2423132 17091418 ~ 17092449 (-) False AMCG00001843

Expression Profile