RNA id: AMCG00001929


Basic Information

Item Value
RNA id AMCG00001929
length 588
RNA type mRNA
GC content 0.52
exon number 3
gene id AMCG00001929
representative True

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 19676348 ~ 19677155 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

atGTCCGACGTGCATGTCATATCAGTCCAAATCCTGTACTACTCCCCGGAGGTTTGGCACCCCCATGGCAGCGGGgtccccatccctctctcctctcgcTGGAACCCACCGCTCACCGGAGTCATGGTGAACGATCAGCCCATGCGATCGTGGACTCCTCCACCCAAATCCGTCCATAAATCTTCCTTCCAGCTGAACAGAAAGACCACTCCCATCACTGAACGCGTTTCCCTCTGTTTCTTGTCCTCCACAGGAAAGGAAGAATACGTGGCGACCTTCAAGGGCTCCGAATACTTCTGCTACGACTTATCCCTGAACCCGATTCAAAGCAGCAGCGACGAAATCACTCTGTCGTTCAAAACCCTGCAGAGGAACGGACTGATGCTGCACACGGGAAAATCGGCGGACTACGTCAACCTGGCTCTGAAAAACGGAGCGGTGTCGCTTGTCATTAATTTGGGGTCGGGCGCTTTTGAAGCTCTGGTGGAGCCGGTGAACGGGAAATTTAATGACAATGATTGGCATGATGTCAAAGTAACAAGGAATCTCCGTCAGGTAACCGTGCAAGAAACGATAGCACAGaactaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU203051 lncRNA downstream 218606 19455124 ~ 19457742 (-) True G161302
TU202931 lncRNA downstream 591372 19084112 ~ 19084976 (-) True G161206
TU202874 lncRNA downstream 774630 18899147 ~ 18901718 (-) True G161165
TU202869 lncRNA downstream 788780 18886294 ~ 18887568 (-) True G161161
TU202859 lncRNA downstream 825464 18842976 ~ 18850884 (-) False G161153
TU203098 lncRNA upstream 414958 20092113 ~ 20093345 (-) True G161346
TU203157 lncRNA upstream 548502 20225657 ~ 20225919 (-) True G161391
TU203216 lncRNA upstream 663270 20340425 ~ 20345341 (-) True AMCG00001945
TU203248 lncRNA upstream 761313 20438468 ~ 20438673 (-) True G161475
TU203244 lncRNA upstream 798773 20475928 ~ 20478231 (-) True G161471
AMCG00001928 mRNA downstream 8908 19647752 ~ 19667440 (-) True AMCG00001928
AMCG00001927 mRNA downstream 41434 19621386 ~ 19634914 (-) True AMCG00001927
AMCG00001919 mRNA downstream 102697 19572199 ~ 19573651 (-) True AMCG00001919
AMCG00001918 mRNA downstream 156716 19515581 ~ 19519632 (-) True AMCG00001918
AMCG00001917 mRNA downstream 164724 19507997 ~ 19511624 (-) True AMCG00001917
AMCG00001925 mRNA upstream 94924 19772079 ~ 19772822 (-) True AMCG00001925
AMCG00001930 mRNA upstream 383724 20060879 ~ 20081368 (-) True AMCG00001930
AMCG00001939 mRNA upstream 420397 20097552 ~ 20099147 (-) True AMCG00001939
AMCG00001938 mRNA upstream 424139 20101294 ~ 20130994 (-) True AMCG00001938
AMCG00001933 mRNA upstream 586249 20263404 ~ 20283502 (-) True AMCG00001933
TU202858 other downstream 825464 18835782 ~ 18850884 (-) True G161153
TU202574 other downstream 1765495 17908754 ~ 17910853 (-) True G160925
TU202549 other downstream 1811030 17860139 ~ 17865318 (-) False AMCG00001863
TU202450 other downstream 2144358 17530866 ~ 17531990 (-) True G160817
TU202328 other downstream 2583899 17091418 ~ 17092449 (-) False AMCG00001843

Expression Profile