RNA id: AMCG00001939


Basic Information

Item Value
RNA id AMCG00001939
length 1596
RNA type mRNA
GC content 0.65
exon number 1
gene id AMCG00001939
representative True

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 20097552 ~ 20099147 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAACGTCAGCACCCCCTCCGCGGGGCCACCGGACGAGGTGGACCCCCACAACGGCACCCTGGGCCTGCCGTTCCCCAGCGGCGCGCTGATCCACACGGCCACGCTGGTCAGCTGCTCCCTGCTGCTGGTCGTGCTCTTCTGCCTGGGCTCCTACGGCAACCTGGTGGTGTTCCTGTCCTTCTTTGACCCGGCCTTCCGCAAATTCAGGACCAACTTTGACTTCATGATCCTGAACCTGTCCTTCTGCGACCTGTTCATCTGCGGCATCACGGCGCCCATGTTCGCCTTCGTACTATTCCTGGACTCCGGCGGCGGCGTCTCCAAGGAGTTCTGCTTCACCTTCCACCTGACCAGCGCAGGCTTCATCATCATGTCCCTGAAGACCGTGGCGGTGATCGCGCTGCACCGGCTGCGCATGGTGCTCGGCCAGCAGCCCACGCGCACGGCCTCCTTCCCCTGCACCCTGATGCTCACCGTGCTGCTGTGGACCACCAGCTTCACGCTGGCCACGCTGGTCACGCTGCGCACCTACCCCTGGAAGTCCAAGGTGTGCCTGCCGCACTTCGGGCTGATTGGCGGCGACGGCAAGATCATCCTGTACCTGTACCTGGTGGACTTCGCCTTCTGCGTGGGCATCGTGTCCGTGTCCTACGTGATGATCGCTCAGGCGCTGCGGAAGAATGCGCAGGTGAGGAAGTGCCCCGTCATCACGGTGGATGCCTCCCGGCCACAGCCGCTGATCGCCACGGGCTTCGAGGGCATGCAGTGCGCCGTCCCCGCGCTCTACCGCAACCAGACCTACAACAAGCTGCAGCACGTGCAGACGCACCCCTACACCTCGGGCCTGGCGCAGGCGGCCGGCGGCGCGGCCAAGTTCCAGCTGGTGTCCTCGGTCAACCTCGCCACGGCCAAGGACTCCAAGGCGGTGGTGACCTGCGTGGTCATCGTGCTGTCCGTGCTGCTCTGCTGTCTTCCCATGGGCATCTCGCTGGTACAGGACGTGCTGTCCCCCGAGGGCAGCTTCATCCTCTACCAGTTCGAGCTGTGCGGCTTCACCCTGGTGTTCCTCAAGTCCGGCATCAACCCGTTCATCTACTCGCGGAACAGCGCGGGGCTGCGGCGCCGGGTGCTGTGGTGCCTGCAGTACGCCGCTCTGGGCTTCCTGTGCTGCAAGCAGAAGACCCGGCTGCGCGCCATGGGCAAGGGCAGCCTGGAGGCCAACCGGAACAAGTCCTCGCATCACGAGACCAACTCCGCCTACATGCTGTCCCCCAAGCCCCAGAGGAAGCTGGTGGACCAGGCCTGCGGGCCGAGCCACTCCAGGGACAGCATCCTCAGTCCCAAGGCCACGGGCGGCCACAAGCCCCATGCCCAGAGCAGCTCCACGCCCATCAACACCCGCATCGAGCCTTACTACAGCATCTACAACAGCAGCCCCTCCCAGGAGGTCAGCTCCCCCAACTCGCTGCAGCCGGTCAACTCCACCTTCAGCTTCGCCAAGTCCTACGTGGCCACGCACTACCACGCACGCCGGGACCTGCTGCAGGACTGTGAGAGCACCTCGGCACGCCAGATCCCCGTGCCCTCCGTCTGA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K08417 GPR75; G protein-coupled receptor 75

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU203098 lncRNA downstream 4207 20092113 ~ 20093345 (-) True G161346
TU203051 lncRNA downstream 639810 19455124 ~ 19457742 (-) True G161302
TU202931 lncRNA downstream 1012576 19084112 ~ 19084976 (-) True G161206
TU202874 lncRNA downstream 1195834 18899147 ~ 18901718 (-) True G161165
TU202869 lncRNA downstream 1209984 18886294 ~ 18887568 (-) True G161161
TU203157 lncRNA upstream 126510 20225657 ~ 20225919 (-) True G161391
TU203216 lncRNA upstream 241278 20340425 ~ 20345341 (-) True AMCG00001945
TU203248 lncRNA upstream 339321 20438468 ~ 20438673 (-) True G161475
TU203244 lncRNA upstream 376781 20475928 ~ 20478231 (-) True G161471
TU203253 lncRNA upstream 379161 20478308 ~ 20478719 (-) True G161480
AMCG00001930 mRNA downstream 16184 20060879 ~ 20081368 (-) True AMCG00001930
AMCG00001925 mRNA downstream 324730 19772079 ~ 19772822 (-) True AMCG00001925
AMCG00001929 mRNA downstream 420397 19676348 ~ 19677155 (-) True AMCG00001929
AMCG00001928 mRNA downstream 430112 19647752 ~ 19667440 (-) True AMCG00001928
AMCG00001927 mRNA downstream 462638 19621386 ~ 19634914 (-) True AMCG00001927
AMCG00001938 mRNA upstream 2147 20101294 ~ 20130994 (-) True AMCG00001938
AMCG00001933 mRNA upstream 164257 20263404 ~ 20283502 (-) True AMCG00001933
AMCG00001945 mRNA upstream 245592 20344739 ~ 20347505 (-) False AMCG00001945
AMCG00001943 mRNA upstream 248845 20347992 ~ 20362451 (-) True AMCG00001943
AMCG00001948 mRNA upstream 264161 20363308 ~ 20392326 (-) True AMCG00001948
TU202858 other downstream 1246668 18835782 ~ 18850884 (-) True G161153
TU202574 other downstream 2186699 17908754 ~ 17910853 (-) True G160925
TU202549 other downstream 2232234 17860139 ~ 17865318 (-) False AMCG00001863
TU202450 other downstream 2565562 17530866 ~ 17531990 (-) True G160817
TU202328 other downstream 3005103 17091418 ~ 17092449 (-) False AMCG00001843

Expression Profile