RNA id: TU201467



Basic Information


Item Value
RNA id TU201467
length 467
RNA type TUCP
GC content 0.47
exon number 2
gene id G160026
representative True

Chromosome Information


Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 14269615 ~ 14270190 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GTTAGCTGAAACAGACAACATTGAAGATGACTTCCAGGACTACTGCTGCTTCATCTTCATCTCCTGCTTGTAATCGGGACAGAACGCCTATGAGACGTCCCTTGGTCTGTAGGTTTTGTAAAAAACTTCAGACAACCCTTTCAGTCCACCTCAGACGAGTGTGTATGAAGAGAGGCACTCCTGATGAGATCGCAGCTGAGATGGAAGCAGCCAAGGAATCAATGCAGAAGTTCCAGTGTGAGGCCAAAGTGATGGACTATAATGTTTGGAAAGCGATGATTGGCGATGAAAGAGTTTTGGCCAaggtgaaaacatacatgatcACCAAAGGAATTGAATTCATCAATGAACCTGCCACGCCATCACCTGCTGCTTCCAATGCGGCTCCTGAGAATCCTCAACCCACGACATCATCTCCGCACTCCTCCTCCTCGGATGAAATGGAGGAATCTGATAAGTCGCAGCNN

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU201465 lncRNA upstream 1893 14267388 ~ 14267722 (+) True G160024
TU201183 lncRNA upstream 1392929 12785795 ~ 12876686 (+) True G159798
TU201187 lncRNA upstream 1458880 12799509 ~ 12810735 (+) True G159800
TU201143 lncRNA upstream 1590126 12676811 ~ 12679489 (+) True G159775
TU200938 lncRNA upstream 2622163 11625671 ~ 11647452 (+) True G159594
TU201478 lncRNA downstream 35835 14306025 ~ 14306260 (+) True G160036
TU201556 lncRNA downstream 255547 14525737 ~ 14526508 (+) True G160107
TU201569 lncRNA downstream 288576 14558766 ~ 14563369 (+) False G160116
TU201568 lncRNA downstream 292664 14562854 ~ 14563369 (+) True G160116
TU201590 lncRNA downstream 359113 14629303 ~ 14632490 (+) True G160129
AMCG00001738 mRNA upstream 6831 14225469 ~ 14262784 (+) True AMCG00001738
AMCG00001742 mRNA upstream 49813 14208042 ~ 14219802 (+) True AMCG00001742
AMCG00001739 mRNA upstream 65842 14079768 ~ 14203773 (+) True AMCG00001739
AMCG00001737 mRNA upstream 191034 14069744 ~ 14078581 (+) True AMCG00001737
AMCG00001725 mRNA upstream 212037 14042918 ~ 14057578 (+) True AMCG00001725
AMCG00001741 mRNA downstream 1163 14271353 ~ 14272191 (+) True AMCG00001741
AMCG00001745 mRNA downstream 2902 14273092 ~ 14274080 (+) True AMCG00001745
AMCG00001736 mRNA downstream 15072 14285262 ~ 14304746 (+) True AMCG00001736
AMCG00001740 mRNA downstream 50296 14320486 ~ 14337875 (+) True AMCG00001740
AMCG00001746 mRNA downstream 203486 14473676 ~ 14482309 (+) True AMCG00001746
TU201065 other upstream 1938167 12329988 ~ 12331448 (+) True AMCG00001691
TU200393 other upstream 4354951 9913308 ~ 9914664 (+) True G159174
TU199983 other upstream 6107800 8159146 ~ 8161815 (+) True G158836
TU199853 other upstream 6336060 7933156 ~ 7933555 (+) True G158725
TU199783 other upstream 6522635 7746681 ~ 7746980 (+) True G158676
TU201667 other downstream 1061430 15331620 ~ 15334567 (+) False AMCG00001760
TU201717 other downstream 1162147 15432337 ~ 15439031 (+) True AMCG00001762
TU202121 other downstream 1967072 16237262 ~ 16295506 (+) False AMCG00001814
TU202141 other downstream 2099223 16369413 ~ 16372304 (+) False AMCG00001814
TU202413 other downstream 3147161 17417351 ~ 17462934 (+) True AMCG00001846

Expression Profile