RNA id: TU202225



Basic Information


Item Value
RNA id TU202225
length 257
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G160631
representative True

Chromosome Information


Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 16816939 ~ 16817195 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATCCATTAAGCAGGTCTTCATACAGGAATTTGTCTGTTTCTCGGAGACAGTCAACAAATAATTGACAGGCGCTTTCCCCCTTTTGCTCCATTATGTTAATGATTGATCGAGCGGCTCTTGTGCCAACTGTCTCGCACTGAATGACATCTTTCTCCTCCAAGTTGATGACGTCTTTACTGTAGAGCTCATCGATAATCTGATGGATGATTGTCGGCCCCATTCTTTGGACAAGTTTCACATAGTTGGTCTTGATGAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU202128 lncRNA downstream 501376 16315327 ~ 16315563 (-) True G160548
TU202118 lncRNA downstream 581136 16234415 ~ 16235803 (-) True G160538
TU201925 lncRNA downstream 987178 15828758 ~ 15829761 (-) False AMCG00001791
TU201932 lncRNA downstream 1020581 15791996 ~ 15796358 (-) True G160387
TU201877 lncRNA downstream 1124325 15691569 ~ 15692614 (-) False AMCG00001784
TU202234 lncRNA upstream 37458 16854653 ~ 16854957 (-) True G160640
TU202283 lncRNA upstream 158253 16975448 ~ 16975879 (-) True G160682
TU202404 lncRNA upstream 591016 17408211 ~ 17408617 (-) True G160783
TU202475 lncRNA upstream 784886 17602081 ~ 17604562 (-) True G160842
TU202538 lncRNA upstream 990823 17808018 ~ 17810015 (-) False AMCG00001865
AMCG00001829 mRNA downstream 18964 16797565 ~ 16797975 (-) True AMCG00001829
AMCG00001826 mRNA downstream 38366 16772176 ~ 16778573 (-) True AMCG00001826
AMCG00001827 mRNA downstream 84364 16724475 ~ 16732575 (-) True AMCG00001827
AMCG00001817 mRNA downstream 138310 16645927 ~ 16678629 (-) True AMCG00001817
AMCG00001816 mRNA downstream 171958 16635464 ~ 16644981 (-) True AMCG00001816
AMCG00001828 mRNA upstream 22199 16839394 ~ 16840260 (-) True AMCG00001828
AMCG00001822 mRNA upstream 82765 16899960 ~ 16905437 (-) True AMCG00001822
AMCG00001823 mRNA upstream 134326 16951521 ~ 16959906 (-) True AMCG00001823
AMCG00001821 mRNA upstream 143270 16960465 ~ 16968616 (-) True AMCG00001821
AMCG00001832 mRNA upstream 160128 16977323 ~ 16990978 (-) True AMCG00001832
TU201878 other downstream 1114439 15693674 ~ 15702500 (-) False AMCG00001784
TU201759 other downstream 1296300 15504311 ~ 15520639 (-) True G160255
TU201753 other downstream 1315171 15499553 ~ 15501768 (-) True AMCG00001771
TU202328 other upstream 274223 17091418 ~ 17092449 (-) False AMCG00001843
TU202450 other upstream 713671 17530866 ~ 17531990 (-) True G160817
TU202549 other upstream 1042944 17860139 ~ 17865318 (-) False AMCG00001863
TU202574 other upstream 1091559 17908754 ~ 17910853 (-) True G160925
TU202858 other upstream 2018587 18835782 ~ 18850884 (-) True G161153

Expression Profile