RNA id: TU202551



Basic Information


Item Value
RNA id TU202551
length 206
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G160903
representative True

Chromosome Information


Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 17866016 ~ 17866221 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tcctggaagaaaacttgcttccttctgctctgacaatgttccccaactctgaggattgttttttccagcaggacaatgctccacgccacacagccaggtcaatcaaggtgtggatggaggaccaccagatcaagaccctgtcatggccagcccaatctccagacctgaaccccattgaaaacctctggaatgtgatcaagaggaag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU202538 lncRNA downstream 56001 17808018 ~ 17810015 (-) False AMCG00001865
TU202475 lncRNA downstream 261454 17602081 ~ 17604562 (-) True G160842
TU202404 lncRNA downstream 457399 17408211 ~ 17408617 (-) True G160783
TU202283 lncRNA downstream 890137 16975448 ~ 16975879 (-) True G160682
TU202234 lncRNA downstream 1011059 16854653 ~ 16854957 (-) True G160640
TU202577 lncRNA upstream 49197 17915418 ~ 17915691 (-) True G160928
TU202598 lncRNA upstream 172483 18038704 ~ 18039374 (-) True G160944
TU202707 lncRNA upstream 396023 18262244 ~ 18346022 (-) True G161030
TU202718 lncRNA upstream 434863 18301084 ~ 18304098 (-) True G161039
TU202859 lncRNA upstream 976755 18842976 ~ 18850884 (-) False G161153
AMCG00001863 mRNA downstream 637 17860166 ~ 17865379 (-) True AMCG00001863
AMCG00001865 mRNA downstream 55919 17808045 ~ 17810097 (-) True AMCG00001865
AMCG00001857 mRNA downstream 281531 17583457 ~ 17584485 (-) True AMCG00001857
AMCG00001855 mRNA downstream 285155 17573660 ~ 17580861 (-) True AMCG00001855
AMCG00001845 mRNA downstream 632711 17216410 ~ 17233305 (-) True AMCG00001845
AMCG00001864 mRNA upstream 7322 17873543 ~ 17879017 (-) True AMCG00001864
AMCG00001869 mRNA upstream 63897 17930118 ~ 17936656 (-) True AMCG00001869
AMCG00001867 mRNA upstream 72692 17938913 ~ 17946511 (-) True AMCG00001867
AMCG00001871 mRNA upstream 262493 18128714 ~ 18130167 (-) True AMCG00001871
AMCG00001870 mRNA upstream 268876 18135097 ~ 18187983 (-) True AMCG00001870
TU202549 other downstream 698 17860139 ~ 17865318 (-) False AMCG00001863
TU202450 other downstream 334026 17530866 ~ 17531990 (-) True G160817
TU202328 other downstream 773567 17091418 ~ 17092449 (-) False AMCG00001843
TU201878 other downstream 2163516 15693674 ~ 15702500 (-) False AMCG00001784
TU201759 other downstream 2345377 15504311 ~ 15520639 (-) True G160255
TU202574 other upstream 42533 17908754 ~ 17910853 (-) True G160925
TU202858 other upstream 969561 18835782 ~ 18850884 (-) True G161153

Expression Profile