RNA id: TU202577



Basic Information


Item Value
RNA id TU202577
length 274
lncRNA type inter_gene
GC content 0.65
exon number 1
gene id G160928
representative True

Chromosome Information


Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 17915418 ~ 17915691 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CGCCGATGCTCCCCCTGCTGTCCAGCCCCTCCGTCCTGCTGTGGTGGTTGTAGCTGCGTTTTCCCAGCATGCCGAGTGGCCCGTGGCTGggcagggaggagagaaggCGTTTCGGGGGCTGGCACTGCAGGCTGAGGGGCCGCGAGCCTCTGGGGCTGTGGGGGGGCGGCCGGGACTctgcaacacacaacacaccgcTGTCACAACGAGCGCCCCCAAACGTCAGAGGGTGGGAGGCGATATTGCGATATCGAAAACACTCAGTGTATGTAGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU202551 lncRNA downstream 49197 17866016 ~ 17866221 (-) True G160903
TU202538 lncRNA downstream 105403 17808018 ~ 17810015 (-) False AMCG00001865
TU202475 lncRNA downstream 310856 17602081 ~ 17604562 (-) True G160842
TU202404 lncRNA downstream 506801 17408211 ~ 17408617 (-) True G160783
TU202283 lncRNA downstream 939539 16975448 ~ 16975879 (-) True G160682
TU202598 lncRNA upstream 123013 18038704 ~ 18039374 (-) True G160944
TU202707 lncRNA upstream 346553 18262244 ~ 18346022 (-) True G161030
TU202718 lncRNA upstream 385393 18301084 ~ 18304098 (-) True G161039
TU202859 lncRNA upstream 927285 18842976 ~ 18850884 (-) False G161153
TU202869 lncRNA upstream 970603 18886294 ~ 18887568 (-) True G161161
AMCG00001864 mRNA downstream 36401 17873543 ~ 17879017 (-) True AMCG00001864
AMCG00001863 mRNA downstream 50039 17860166 ~ 17865379 (-) True AMCG00001863
AMCG00001865 mRNA downstream 105321 17808045 ~ 17810097 (-) True AMCG00001865
AMCG00001857 mRNA downstream 330933 17583457 ~ 17584485 (-) True AMCG00001857
AMCG00001855 mRNA downstream 334557 17573660 ~ 17580861 (-) True AMCG00001855
AMCG00001869 mRNA upstream 14427 17930118 ~ 17936656 (-) True AMCG00001869
AMCG00001867 mRNA upstream 23222 17938913 ~ 17946511 (-) True AMCG00001867
AMCG00001871 mRNA upstream 213023 18128714 ~ 18130167 (-) True AMCG00001871
AMCG00001870 mRNA upstream 219406 18135097 ~ 18187983 (-) True AMCG00001870
AMCG00001885 mRNA upstream 301255 18216946 ~ 18223752 (-) True AMCG00001885
TU202574 other downstream 4565 17908754 ~ 17910853 (-) True G160925
TU202549 other downstream 50100 17860139 ~ 17865318 (-) False AMCG00001863
TU202450 other downstream 383428 17530866 ~ 17531990 (-) True G160817
TU202328 other downstream 822969 17091418 ~ 17092449 (-) False AMCG00001843
TU201878 other downstream 2212918 15693674 ~ 15702500 (-) False AMCG00001784
TU202858 other upstream 920091 18835782 ~ 18850884 (-) True G161153

Expression Profile