RNA id: TU202644



Basic Information


Item Value
RNA id TU202644
length 268
lncRNA type inter_gene
GC content 0.60
exon number 1
gene id G160985
representative True

Chromosome Information


Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 18218764 ~ 18219031 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTCTGGGACTTGAGATCTGTGGGCTCTTATTCTAGCgtctctgtccgtctgtgtctctgtactcACACAGCGCCACAGCGTTCAGCATGCCGGTGTAGGGCGACGCCCCCATGGACTGGTAGATGATGCCGATGCGGTCCTGGATCGCCCCTTTGGTGATGTCTCGGTCCAGCTTCATGACGAAGAAGGCCACGAACAGGCCGTAGATGAGGTTCTGCGAGAGGCGCATCAGCACGCCCATCCGGTCCCGGGACAGGTTCCTGGCGGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU202597 lncRNA upstream 179390 18038704 ~ 18039374 (+) True G160943
TU202592 lncRNA upstream 188948 18024196 ~ 18029816 (+) True G160939
TU202559 lncRNA upstream 301710 17916795 ~ 17917054 (+) True G160910
TU202542 lncRNA upstream 357337 17860162 ~ 17861427 (+) True G160895
TU202511 lncRNA upstream 414586 17798199 ~ 17804178 (+) True G160869
TU202880 lncRNA downstream 704418 18923449 ~ 18923672 (+) True G161170
TU203031 lncRNA downstream 1236057 19455088 ~ 19457752 (+) True G161282
TU203034 lncRNA downstream 1289212 19508243 ~ 19508522 (+) True G161285
TU203158 lncRNA downstream 2017146 20236177 ~ 20236391 (+) True G161392
TU203242 lncRNA downstream 2255640 20474671 ~ 20474889 (+) True G161469
AMCG00001883 mRNA upstream 2141 18210009 ~ 18216623 (+) True AMCG00001883
AMCG00001881 mRNA upstream 9373 18193816 ~ 18209391 (+) True AMCG00001881
AMCG00001868 mRNA upstream 277974 17937744 ~ 17940790 (+) True AMCG00001868
AMCG00001866 mRNA upstream 287485 17885198 ~ 17931279 (+) True AMCG00001866
AMCG00001860 mRNA upstream 419411 17794741 ~ 17799353 (+) True AMCG00001860
AMCG00001882 mRNA downstream 5023 18224054 ~ 18230265 (+) True AMCG00001882
AMCG00001875 mRNA downstream 68681 18287712 ~ 18294690 (+) True AMCG00001875
AMCG00001872 mRNA downstream 109460 18328491 ~ 18340877 (+) True AMCG00001872
AMCG00001873 mRNA downstream 128765 18347796 ~ 18358955 (+) True AMCG00001873
AMCG00001874 mRNA downstream 145271 18364302 ~ 18367236 (+) True AMCG00001874
TU202641 other upstream 1626 18216575 ~ 18217138 (+) False AMCG00001883
TU202633 other upstream 17909 18187902 ~ 18200855 (+) False AMCG00001881
TU202413 other upstream 755830 17417351 ~ 17462934 (+) True AMCG00001846
TU202141 other upstream 1846460 16369413 ~ 16372304 (+) False AMCG00001814
TU202121 other upstream 1923258 16237262 ~ 16295506 (+) False AMCG00001814
TU202803 other downstream 451251 18670282 ~ 18672421 (+) False AMCG00001880
TU202872 other downstream 680306 18899337 ~ 18901718 (+) True AMCG00001889

Expression Profile