RNA id: TU203098



Basic Information


Item Value
RNA id TU203098
length 397
lncRNA type inter_gene
GC content 0.61
exon number 4
gene id G161346
representative True

Chromosome Information


Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 20092113 ~ 20093345 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GCCGCACCTGTATTTGGGGTGGCTGCACAGCAGGGGCGTCAGCACCACCACCTCGTACTCGCAGGTCGTGACCTCGGCGATGGACAGGATCTCGTGCTTGGCCTCAGGGTGGCACACGTACAGGACGCGGCTGGAGCGCGGCTGGCTCTGCTTCAGCACGCAGGGCGTCCCGTTGCCCATCTCCACCGGGTAGTAGGGCGTCAGCTGGCCTTCCACGTTCTTGGTGGGCACCTCCTTCTCCGGATCTCTCTTCTCCGGCTCGCTTTCCTCAGCTCTCCCCTCTTCCGCTCCTGCGGCTGACGGGTCACTTTTCTTCATCATGTTTCCCAGGTAGTATTCCtggatgtttattttCTGCCCCGTCTCCTTCTCCTCGTGGTACTGCCGCACATGCTTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU203051 lncRNA downstream 634371 19455124 ~ 19457742 (-) True G161302
TU202931 lncRNA downstream 1007137 19084112 ~ 19084976 (-) True G161206
TU202874 lncRNA downstream 1190395 18899147 ~ 18901718 (-) True G161165
TU202869 lncRNA downstream 1204545 18886294 ~ 18887568 (-) True G161161
TU202859 lncRNA downstream 1241229 18842976 ~ 18850884 (-) False G161153
TU203157 lncRNA upstream 132312 20225657 ~ 20225919 (-) True G161391
TU203216 lncRNA upstream 247080 20340425 ~ 20345341 (-) True AMCG00001945
TU203248 lncRNA upstream 345123 20438468 ~ 20438673 (-) True G161475
TU203244 lncRNA upstream 382583 20475928 ~ 20478231 (-) True G161471
TU203253 lncRNA upstream 384963 20478308 ~ 20478719 (-) True G161480
AMCG00001930 mRNA downstream 10745 20060879 ~ 20081368 (-) True AMCG00001930
AMCG00001925 mRNA downstream 319291 19772079 ~ 19772822 (-) True AMCG00001925
AMCG00001929 mRNA downstream 414958 19676348 ~ 19677155 (-) True AMCG00001929
AMCG00001928 mRNA downstream 424673 19647752 ~ 19667440 (-) True AMCG00001928
AMCG00001927 mRNA downstream 457199 19621386 ~ 19634914 (-) True AMCG00001927
AMCG00001939 mRNA upstream 4207 20097552 ~ 20099147 (-) True AMCG00001939
AMCG00001938 mRNA upstream 7949 20101294 ~ 20130994 (-) True AMCG00001938
AMCG00001933 mRNA upstream 170059 20263404 ~ 20283502 (-) True AMCG00001933
AMCG00001945 mRNA upstream 251394 20344739 ~ 20347505 (-) False AMCG00001945
AMCG00001943 mRNA upstream 254647 20347992 ~ 20362451 (-) True AMCG00001943
TU202858 other downstream 1241229 18835782 ~ 18850884 (-) True G161153
TU202574 other downstream 2181260 17908754 ~ 17910853 (-) True G160925
TU202549 other downstream 2226795 17860139 ~ 17865318 (-) False AMCG00001863
TU202450 other downstream 2560123 17530866 ~ 17531990 (-) True G160817
TU202328 other downstream 2999664 17091418 ~ 17092449 (-) False AMCG00001843

Expression Profile