RNA id: TU203157


Basic Information

Item Value
RNA id TU203157
length 263
lncRNA type inter_gene
GC content 0.26
exon number 1
gene id G161391
representative True

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 20225657 ~ 20225919 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTTTACTTTAGTTTAATTAGTACAGAAGTTCTTTCATTGAGTTTCCTGAAGAACTTGTCATTCAccttttaatacacatttaaaaaaacaagcaagtagcgtatcaaatatttatttatcaaacaaGATGATCTCTTTTAATAGTGAACACTTacaaattgtttgtttgttttaaaaatgtaaatcttagGAAAAAGGTGGATACctgaaaaaattacatttgtgcaTCACAAATTATTACACAACAGAAATAGAATATGCTT

Function

GO: NA

KEGG:

id description
ko04976 Bile secretion

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU203098 lncRNA downstream 132312 20092113 ~ 20093345 (-) True G161346
TU203051 lncRNA downstream 767915 19455124 ~ 19457742 (-) True G161302
TU202931 lncRNA downstream 1140681 19084112 ~ 19084976 (-) True G161206
TU202874 lncRNA downstream 1323939 18899147 ~ 18901718 (-) True G161165
TU202869 lncRNA downstream 1338089 18886294 ~ 18887568 (-) True G161161
TU203216 lncRNA upstream 114506 20340425 ~ 20345341 (-) True AMCG00001945
TU203248 lncRNA upstream 212549 20438468 ~ 20438673 (-) True G161475
TU203244 lncRNA upstream 250009 20475928 ~ 20478231 (-) True G161471
TU203253 lncRNA upstream 252389 20478308 ~ 20478719 (-) True G161480
AMCG00001938 mRNA downstream 94663 20101294 ~ 20130994 (-) True AMCG00001938
AMCG00001939 mRNA downstream 126510 20097552 ~ 20099147 (-) True AMCG00001939
AMCG00001930 mRNA downstream 144289 20060879 ~ 20081368 (-) True AMCG00001930
AMCG00001925 mRNA downstream 452835 19772079 ~ 19772822 (-) True AMCG00001925
AMCG00001929 mRNA downstream 548502 19676348 ~ 19677155 (-) True AMCG00001929
AMCG00001933 mRNA upstream 37485 20263404 ~ 20283502 (-) True AMCG00001933
AMCG00001945 mRNA upstream 118820 20344739 ~ 20347505 (-) False AMCG00001945
AMCG00001943 mRNA upstream 122073 20347992 ~ 20362451 (-) True AMCG00001943
AMCG00001948 mRNA upstream 137389 20363308 ~ 20392326 (-) True AMCG00001948
AMCG00001947 mRNA upstream 180412 20406331 ~ 20411457 (-) True AMCG00001947
TU202858 other downstream 1374773 18835782 ~ 18850884 (-) True G161153
TU202574 other downstream 2314804 17908754 ~ 17910853 (-) True G160925
TU202549 other downstream 2360339 17860139 ~ 17865318 (-) False AMCG00001863
TU202450 other downstream 2693667 17530866 ~ 17531990 (-) True G160817
TU202328 other downstream 3133208 17091418 ~ 17092449 (-) False AMCG00001843

Expression Profile