RNA id: TU203253


Basic Information

Item Value
RNA id TU203253
length 313
lncRNA type inter_gene
GC content 0.51
exon number 2
gene id G161480
representative True

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 20478308 ~ 20478719 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCCCGCTGGTGTAAACCTCCAGCTGTCCGTTAATGTTGCTCTTGTCCACCAGGGAGTGCAGGACGTTGAGCACACTGTGCACGTTCCAGATCTTTGGGTTGTTCCTCAGAAACTCAATCTCCTCCTCGGATTTCTTGGCCGTCTTACAGCGGTACTGACTGAAGGACTGGAACCTGGTAGATGAATTCATCTATGATGTCCCACAGCCACTGGTTAGGAAGCTCCAGAGGGGCAGGCCCATCTGCATCTGTggaatttaatttcagagtcTTAACAAAATCTCCTCGGCTTCAGTAGATCCTTCCTGAGGCTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU203244 lncRNA downstream 77 20475928 ~ 20478231 (-) True G161471
TU203248 lncRNA downstream 39635 20438468 ~ 20438673 (-) True G161475
TU203216 lncRNA downstream 132967 20340425 ~ 20345341 (-) True AMCG00001945
TU203157 lncRNA downstream 252389 20225657 ~ 20225919 (-) True G161391
TU203098 lncRNA downstream 384963 20092113 ~ 20093345 (-) True G161346
AMCG00001949 mRNA downstream 9922 20443377 ~ 20468386 (-) True AMCG00001949
AMCG00001947 mRNA downstream 66851 20406331 ~ 20411457 (-) True AMCG00001947
AMCG00001948 mRNA downstream 85982 20363308 ~ 20392326 (-) True AMCG00001948
AMCG00001943 mRNA downstream 115857 20347992 ~ 20362451 (-) True AMCG00001943
AMCG00001945 mRNA downstream 130803 20344739 ~ 20347505 (-) False AMCG00001945
TU202858 other downstream 1627424 18835782 ~ 18850884 (-) True G161153
TU202574 other downstream 2567455 17908754 ~ 17910853 (-) True G160925
TU202549 other downstream 2612990 17860139 ~ 17865318 (-) False AMCG00001863
TU202450 other downstream 2946318 17530866 ~ 17531990 (-) True G160817
TU202328 other downstream 3385859 17091418 ~ 17092449 (-) False AMCG00001843

Expression Profile