Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00002019 |
| length | 450 |
| RNA type | mRNA |
| GC content | 0.56 |
| exon number | 4 |
| gene id | AMCG00002019 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 682670 ~ 992764 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0009972 | cytidine deamination | biological_process |
| GO:0008270 | zinc ion binding | molecular_function |
| GO:0004126 | cytidine deaminase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU150675 | lncRNA | upstream | 14689 | 667739 ~ 668057 (+) | True | G120254 |
| TU150611 | lncRNA | upstream | 559578 | 122542 ~ 123168 (+) | True | G120201 |
| TU150603 | lncRNA | upstream | 579473 | 100119 ~ 103273 (+) | True | G120193 |
| TU150981 | lncRNA | downstream | 1180229 | 1874212 ~ 1876528 (+) | True | G120494 |
| TU151008 | lncRNA | downstream | 1203951 | 1897934 ~ 1955361 (+) | True | G120516 |
| TU151033 | lncRNA | downstream | 1302444 | 1996427 ~ 2005914 (+) | True | G120536 |
| TU151065 | lncRNA | downstream | 1479487 | 2173470 ~ 2174499 (+) | True | G120563 |
| TU151066 | lncRNA | downstream | 1480604 | 2174587 ~ 2176442 (+) | True | G120564 |
| AMCG00002015 | mRNA | upstream | 6250 | 672284 ~ 676496 (+) | True | AMCG00002015 |
| AMCG00002014 | mRNA | upstream | 113694 | 568090 ~ 569052 (+) | True | AMCG00002014 |
| AMCG00002009 | mRNA | upstream | 284260 | 334436 ~ 398486 (+) | True | AMCG00002009 |
| AMCG00002005 | mRNA | upstream | 366184 | 298511 ~ 316562 (+) | True | AMCG00002005 |
| AMCG00002000 | mRNA | upstream | 393013 | 280207 ~ 289733 (+) | True | AMCG00002000 |
| AMCG00002017 | mRNA | downstream | 6438 | 700421 ~ 705317 (+) | True | AMCG00002017 |
| AMCG00002016 | mRNA | downstream | 14300 | 708283 ~ 713002 (+) | True | AMCG00002016 |
| AMCG00002018 | mRNA | downstream | 35869 | 729852 ~ 738673 (+) | True | AMCG00002018 |
| AMCG00002023 | mRNA | downstream | 126230 | 820213 ~ 820962 (+) | True | AMCG00002023 |
| AMCG00002022 | mRNA | downstream | 159329 | 853312 ~ 859489 (+) | True | AMCG00002022 |
| TU151011 | other | downstream | 1230039 | 1924022 ~ 1940816 (+) | True | G120518 |
| TU151290 | other | downstream | 2262925 | 2956908 ~ 2959475 (+) | True | G120742 |
| TU151426 | other | downstream | 2839831 | 3533814 ~ 3536428 (+) | False | AMCG00002098 |
| TU151430 | other | downstream | 2843636 | 3537619 ~ 3539554 (+) | False | AMCG00002098 |
| TU151873 | other | downstream | 4524847 | 5218830 ~ 5223498 (+) | True | AMCG00002152 |
