RNA id: AMCG00002034



Basic Information


Item Value
RNA id AMCG00002034
length 717
RNA type mRNA
GC content 0.57
exon number 6
gene id AMCG00002034
representative True

Chromosome Information


Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 1311197 ~ 1317051 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGACAACACAGCCGCCGAGATACTGGGTCTTGTTTTAGGACTGTCTGGCATCGGCCTTCTGATCCTGGCGAACGCAACCGACTGCTGGAGGCACGATGCGAAGGACCAGTTCTCCTCCGTGGGGCTGAGCGCCCGCTGTCGTGGGCTGTGGAGCGAGTGTCTTTTTGACAACATGGCCAACATCTGGACCTGTGACATCCCCCTCTCCTACCTGGGGGACCTGCCTGTGGACATGGTCGTGACTCGGGCATTAGTGATTGTCACCTGTGGGGTCTGCGTCGTGGGGATTGTGGGCCTCGTCTGTGGGATGAAGTGCACGACGCTGGTCTGCGATGCCGACAGCCAGAAAGACAAGCTGACCGTGAGCTCTGGTGCCCTCTTTCTCTTCGCTGGTGTCTGTGGTGCGGTGGGGCTGTTCTGGTACGGTATTGACACTCTCCTCAAATACAGACAAGAGGTGATCTGCTCTTTTAAGGTGGCGTTCGGCATACCTGGAGTGACGTACGAGTTGGGCTACTCCTACTGGTTCGCCTCAGGTGGGGTGGCTTGTCAATTGGCTACTGGACTGATCATTCTGACCGTAAACTGTTTCCGTCAGAGGAAGGCTGCCCAGCGGAGAACTCCGAGACCCCCGGCACTACAGAGCACCCCCCCACGTCCCGACGAAGGGGCTGCTAACAagctaGGTTTTCAAAATCTATTGTCCCAAAGGTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU150675 lncRNA upstream 643140 667739 ~ 668057 (+) True G120254
TU150611 lncRNA upstream 1188029 122542 ~ 123168 (+) True G120201
TU150603 lncRNA upstream 1207924 100119 ~ 103273 (+) True G120193
TU150981 lncRNA downstream 557161 1874212 ~ 1876528 (+) True G120494
TU151008 lncRNA downstream 580883 1897934 ~ 1955361 (+) True G120516
TU151033 lncRNA downstream 679376 1996427 ~ 2005914 (+) True G120536
TU151065 lncRNA downstream 856419 2173470 ~ 2174499 (+) True G120563
TU151066 lncRNA downstream 857536 2174587 ~ 2176442 (+) True G120564
AMCG00002033 mRNA upstream 83119 1202250 ~ 1228078 (+) True AMCG00002033
AMCG00002032 mRNA upstream 131902 1164861 ~ 1179295 (+) True AMCG00002032
AMCG00002027 mRNA upstream 282632 1009222 ~ 1028565 (+) True AMCG00002027
AMCG00002030 mRNA upstream 324814 967777 ~ 986383 (+) True AMCG00002030
AMCG00002028 mRNA upstream 353824 952521 ~ 957373 (+) True AMCG00002028
AMCG00002040 mRNA downstream 69617 1386668 ~ 1388576 (+) True AMCG00002040
AMCG00002041 mRNA downstream 75209 1392260 ~ 1410838 (+) True AMCG00002041
AMCG00002038 mRNA downstream 116057 1433108 ~ 1438698 (+) True AMCG00002038
AMCG00002039 mRNA downstream 147193 1464244 ~ 1472376 (+) True AMCG00002039
AMCG00002045 mRNA downstream 386179 1703230 ~ 1709587 (+) True AMCG00002045
TU150681 other upstream 318433 693622 ~ 992764 (+) True AMCG00002019
TU150678 other upstream 626871 682670 ~ 684326 (+) False AMCG00002019
TU151011 other downstream 606971 1924022 ~ 1940816 (+) True G120518
TU151290 other downstream 1639857 2956908 ~ 2959475 (+) True G120742
TU151426 other downstream 2216763 3533814 ~ 3536428 (+) False AMCG00002098
TU151430 other downstream 2220568 3537619 ~ 3539554 (+) False AMCG00002098
TU151873 other downstream 3901779 5218830 ~ 5223498 (+) True AMCG00002152

Expression Profile