RNA id: AMCG00002067


Basic Information

Item Value
RNA id AMCG00002067
length 627
RNA type mRNA
GC content 0.57
exon number 5
gene id AMCG00002067
representative True

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 2522750 ~ 2532760 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGGAGCAAAGCATTTCTCAGGAAGAGCCGCAGCTAATCTTCTCGGCTactgttttttctgtgtttggtCCCCGGTGATTGCCATTAATCCGTGCCTGGCGGCAGTGCAGGGAAGCCGGCGCAGCGGGAAAACGCTGCACTGGTTTGACATCCAGCATCCATACGTGACGTATGATGGGAATTATTGCCCCGAGATGGTAACCGTGCAGTCGCTCAACAGCCTCAACGACCAGATCGCCCACTTCATGGTGAACCGGCCCAAAGCTCTGGACGACGAGGACGATGCTTTCCTCCCCAGCGAGAAGGAGACCTTGAAGAAGTCCATGACCTTGATGAGACACCTGCTGATGGATGCTCAGCCGACATTATCACCCACAACATCTTCAAAAGCTCATCACTGGCGCCAGCCAGCTGGAGCTGCTGAGGGCTGGACGGAAGCCAAGACGCAGAGCAGCGAGAGTCGAAACGCAAGTAATTTGGTCGGAGCGCCGCTCAAGCCCCTGGAGTCGCGCCGACGCGTTTCCCTTTCATCTCTGCAGCCGGCAGTGCGCTCCTCCGCCCCGAGAGCGCAGATCTGGCCCATCGCCTACCACGGCAGCCGAGGCTTCATTAAACCGAATCATTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU151109 lncRNA downstream 298345 2223343 ~ 2224405 (-) True G120601
TU151094 lncRNA downstream 359894 2162641 ~ 2162856 (-) True G120589
TU151076 lncRNA downstream 526683 1995768 ~ 1996067 (-) True G120574
TU151075 lncRNA downstream 528727 1993728 ~ 1994023 (-) True G120573
TU151074 lncRNA downstream 529127 1993333 ~ 1993623 (-) True G120572
TU151217 lncRNA upstream 162821 2695581 ~ 2695977 (-) True G120683
TU151216 lncRNA upstream 163303 2696063 ~ 2696387 (-) False G120683
TU151243 lncRNA upstream 312622 2845382 ~ 2847937 (-) True AMCG00002078
TU151291 lncRNA upstream 420513 2953273 ~ 2953482 (-) True G120743
TU151294 lncRNA upstream 452813 2985573 ~ 2986779 (-) True G120746
AMCG00002066 mRNA downstream 54146 2468255 ~ 2468604 (-) True AMCG00002066
AMCG00002065 mRNA downstream 202780 2310794 ~ 2319970 (-) True AMCG00002065
AMCG00002064 mRNA downstream 227030 2282905 ~ 2295720 (-) True AMCG00002064
AMCG00002062 mRNA downstream 257214 2257811 ~ 2265536 (-) True AMCG00002062
AMCG00002063 mRNA downstream 279433 2240408 ~ 2243317 (-) True AMCG00002063
AMCG00002068 mRNA upstream 102509 2635269 ~ 2645414 (-) True AMCG00002068
AMCG00002070 mRNA upstream 121058 2653818 ~ 2662801 (-) True AMCG00002070
AMCG00002071 mRNA upstream 145624 2678384 ~ 2680488 (-) True AMCG00002071
AMCG00002069 mRNA upstream 149942 2682702 ~ 2689587 (-) True AMCG00002069
AMCG00002072 mRNA upstream 168478 2701238 ~ 2727268 (-) True AMCG00002072
TU151271 other upstream 388492 2921252 ~ 2923221 (-) False AMCG00002085
TU151301 other upstream 462748 2995508 ~ 3004917 (-) True G120748
TU151364 other upstream 580682 3113442 ~ 3127944 (-) True AMCG00002094
TU151499 other upstream 1181107 3713867 ~ 3716252 (-) True G120907
TU151529 other upstream 1251476 3784236 ~ 3786544 (-) True G120927

Expression Profile