RNA id: TU151382


Basic Information

Item Value
RNA id TU151382
length 261
lncRNA type sense_over
GC content 0.68
exon number 1
gene id AMCG00002091
representative False

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 3173505 ~ 3186353 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GGCGGCACGAGCACCCGGGAGAAGCGCAACGGGAAGGTGCCCAAGCCGGTGCTGCTGCACCAGAACAGCACCGAGGTCTCGTCCACCAACCAGGTGGAGGTGCCCGACACCACGCAGAACTCGCCCGTGTCCATCAGCAGCGGCCTGAACAGCGACCCCGACATGGCCGACAGCCCGGTGGTGACCGGCATGAGCCACGTGGCGTCGGTGATGAGCAGCCTGTCCCAGAGCGCCGCCGTGTTCATGTCCGAGGTGACGGGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU151354 lncRNA downstream 83685 3091776 ~ 3092899 (-) True G120789
TU151321 lncRNA downstream 134084 3040548 ~ 3042500 (-) True G120760
TU151314 lncRNA downstream 156428 3008901 ~ 3020156 (-) True G120754
TU151294 lncRNA downstream 189805 2985573 ~ 2986779 (-) True G120746
TU151291 lncRNA downstream 223102 2953273 ~ 2953482 (-) True G120743
TU151407 lncRNA upstream 230641 3407485 ~ 3466461 (-) False AMCG00002097
TU151417 lncRNA upstream 316112 3492956 ~ 3494050 (-) True G120841
TU151419 lncRNA upstream 323437 3500281 ~ 3502928 (-) True G120842
TU151418 lncRNA upstream 323480 3500324 ~ 3502928 (-) False G120842
TU151429 lncRNA upstream 358978 3535822 ~ 3536525 (-) True G120849
AMCG00002095 mRNA downstream 29537 3146604 ~ 3147047 (-) True AMCG00002095
AMCG00002093 mRNA downstream 30104 3134108 ~ 3146480 (-) True AMCG00002093
AMCG00002094 mRNA downstream 48144 3113477 ~ 3128440 (-) False AMCG00002094
AMCG00002092 mRNA downstream 65676 3095720 ~ 3110908 (-) True AMCG00002092
AMCG00002090 mRNA downstream 86700 3087544 ~ 3089884 (-) True AMCG00002090
AMCG00002096 mRNA upstream 97579 3274423 ~ 3274918 (-) True AMCG00002096
AMCG00002097 mRNA upstream 262201 3439045 ~ 3451247 (-) True AMCG00002097
AMCG00002104 mRNA upstream 319315 3496159 ~ 3498806 (-) True AMCG00002104
AMCG00002102 mRNA upstream 326202 3503046 ~ 3510980 (-) True AMCG00002102
AMCG00002103 mRNA upstream 350508 3527352 ~ 3533819 (-) True AMCG00002103
TU151364 other downstream 48640 3113442 ~ 3127944 (-) True AMCG00002094
TU151301 other downstream 171667 2995508 ~ 3004917 (-) True G120748
TU151271 other downstream 253363 2921252 ~ 2923221 (-) False AMCG00002085
TU151499 other upstream 537023 3713867 ~ 3716252 (-) True G120907
TU151529 other upstream 607392 3784236 ~ 3786544 (-) True G120927
TU151612 other upstream 1037871 4214715 ~ 4219877 (-) True G120993
TU152605 other upstream 4659651 7836495 ~ 7839411 (-) True AMCG00002223
TU153137 other upstream 6655067 9831911 ~ 9833224 (-) True AMCG00002276

Expression Profile