RNA id: AMCG00002137


Basic Information

Item Value
RNA id AMCG00002137
length 6063
RNA type mRNA
GC content 0.48
exon number 18
gene id AMCG00002137
representative True

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 4651295 ~ 4673352 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTGTAGGTGGGGTCTCGGTTCCCAAGGTTCACTCCCAGAGCTGAACAGAGGAATGCACACACTTTAACTTGATCAAGTAATTCcttcttcctgtttttaatcACGTCCCTTCTGTGCTAGAGAGGGGGGCCCAGTGCTCTGAGAGGGACGAGCGGGACTGCAAATATCTGGTCGAGGGTAAAGAGAAAGTACTGCTTCAGTGCTCAGCAGATGTGAGGAAATCTGTGCTTCAGACTTGTCAAAACCGAAAAGGAGTGTTTTATAACCCTGATGCGTATGGCAAGAGCAGGTTGTGCCCCGAGCGAGGAGGAGACACGCTCACCTCGTAAAATCCTCAGTGCCGGACAGTGGCGATGGAGTAGATGTCAAGAGGAGTAGGAAGCAAAGGATGTCCACGTACAAGCGGACCACTTTGGACGATGACGACTTGGTGGACTCCGCGGTGGATGAGGTTTACCCCAACGGAATGCAGgtgAGTCTGATGGGGCCGAGTCACAGCACCCGCTGCTGGGCAGGATGGACGGGCATGGAGAAGAGACTGCTGGTCCTGGTGGGGTTTCTGTCAGCCGCCCTGCTGGTCAGCGTGCTCGTGATGGGGATCCACTACAAACACGATCACCCCCGGGTGTGCCTGTCGGAGGCCTGTGTGACGGTGGCCAGTACGGTCATGGGGGCCCTGAACCGCAAAGTGGACCCCTGCGAGGACTTCTATGCGTTTGCCTGCGGGGGCTGGGTGCAGGCCAACCCCCTGCCCGATGGACATGCACGCTGGGGCACCTTCAACAATCTGTGGGAGCACAACCAGGCCATCATGAAGCACCTGCTGGagaacaccagTATGACTGGGATCAGCGAGGCGGAGCGCAAGGCCCAGAGATACTATCAGGCCTGCATGAATGAAGACAAGATCAAAGAGCTGGGAGCCAGGCCCCTGCAGGAACTCATTAACCAGACAGGGGGCTGGGCTCTGACAGGTCCCTGGGACAAGGACAATTTCCAGGAGGTCCTGATCACCGTGTCGTCCCTCTACCGCACCTCGCCTTTCTTCTCTGTGTATGTCAGCACTGACTCCAAGAACTCCAACAGCAACGTCATCCAGGTGGATCAGTCTGGGCTCGGTTTACCGTCCAGAGATTACTACCTCAACACCACGGCCAACCACAAAGTGTTGACGGCCTACCTGAATTTCCTGGTGGAGGTGGGAGTGCTTTTGGGTGGCACCGAGGCCTCCACCCGAGTGCAGATGCAGGAGATCTTGGATTTCGAGACGACTCTGGCCAACATCACGGTGCCCCAGGAGGAACGTATGGACGAGGAGCTCATCTACCATAAGATGCCGGCTAGGGAGCTGCAGACTCTGGCCCCAGTGGTGGACTGGATGCCGCTGCTCTCGGCCGTGTTCGCGCCTGTGGAGCTGAACGACTCGGAGCCGGTAGTGGTTTATGCCAAAGAGTACCTGCAGCAAGTATCTGACCTCATCAACAGCACCAGCAAGAGTCTCCTCAATACCTACATGATGTTGACGGTGGTGCGCAAGATGGCTTCCAACCTGGACCAGCGCTTCCAGGATGCCGAGGAGCGGTTCCTGGAGGCCATGTACGGCACCAAGAAGAGCTGTGTTCCTCGCTGGAAGCTGTGCGTCAGTGACACGGACAGCGCCCTGGGCTTCTCCCTGGGAGCCATGTTTGTCAAGGCCACGTTTGTAGAAGACAGTAAAGCCATAGCAGAAGACATGATCTCGGAAATAAAAGCCGCCTTTGAGGACCATTTAAAGTACGTGAGCTGGATGGATCCAGAGACCAAAAAAGATGCAAAAGAGAAGGCGGACGCAATCTACAACATGATCGGATACCCCAAGTTTATTATGGATCACAAGGAGCTGGACAAGGTGTTCAGTGATTATGAGGTGGTGAAGGATCTGTACTTCCAGAACGTCATACAGTACTACAACTTCTCTGCCCGAGTCACCGCAGACCAGCTCAGAAAAGCCCCAAACCGGGACCAGGCTCTTAATTTTGGAGGGATCGGAGTGGTGATGGGACATGAGCTGACCCATGCTTTTGATGATCAAGTGGAAGCCTTCAAGAAGCAGACGCAGTGTATGGTGGAGCAGTACAGCAACTACAGCATCAACCGGGAGCCCCTGAACGGGAAGCACACCCTGGGGGAGAACATTGCCGACAATGGGGGGCTTAAGGCGGCCTACAAGGCCTACGAGAACTGGGTCCGGAAGAACGGCGAGGAGGAGGTTCTGCCGGCACTGGGGATGACCAATCAGCAGCTGTTCTTCCTAGGATTCGCACAGGTCTGGTGCTCGGTGCGAACCCCGGAGAGCTCCCACGAAGGCGTGATCACGGACCCCCACAGCCCGTCCCGGTTCCGAGTCATCGGGACCGTGTCCAACTCGCCTGAATTCGCCAAGCACTTCCACTGCCCGCCCGACACCCCAATGAACCCGAGTCGCAAGTGTGAACTGTGGTGATTCCCGGGACAACAGCAGGCACTGGCTCCTTGAAACGAGGTGGGATCCTTTCCAAagatagcgcttttccaccgacaaggagccggtgctggagccggagccgctgCTCGGCATGGGATCCAGCTGATCTTTTTGGgaaccggcccgcttttccgccggttttggaaccgaacCCAAGCgcggagtagaagagaaacacggcagtaataatcagcaccgaggcgactgcgaCTTTAAACCCTATTACATCACAATCCAACCCATTCAGcgtcacacagcacagatacactgtaaaaaccaaacaaaaaacgcGTGTAGCAGAAACTAAAATACagctatacgaatatgctaagataacagccttttattttattgatttttattgatgcattaagggatttacactgATTCGCTATTTCGGACACTTTTActgcattgaataaaatacatgcattcatcaccgctcacacagttcattatgaatatactttgtatgagtggatacattttcattcattttgtggcgtatttttactttaattcttgtttaaacacaatgactataggctggcctattgattatggatgcggctgttttgggggtgtttGCGGCGCAGTCgcgggcagatcaataaactcggatgatctcaggtgatgttaatggtttgatgggaaattgtgctgaTTGATGaggtctgggatgatggtccaaATCACTGTTGCTTTGTCtctgttgccagacacgcagcgaTGCGCTTATGtgttgaaagtcgccctggataagagcgtctgctaacaaatacacaataataacaataatataataataataataataatccattgtcagcactgctggcgtgtgagcacaaatactgtgtatttgatctcttactgtacaatatgtgtgttttgtgtaattcgccctgtgctaagaaaattaatttattcataaatgatgaatcatgcgcaaaccaacccgggacacgTGACTCGTAGCGGCGCTGGATTCGGCGTCACACCGGAGCAGATAATGACCagatcattaaaacaacatttctgtccaataatatcgtcgcattaactctcatcatcatcatcatcatcatctcgctgtaacacgtctttcctgtCACGGAAGCTGCGCTCGGTCGTCTCTCATCGCTGCCATTTGACAACAACTAACTAGTTACTGACCTGTGAGACACATTGTCACTGTAGTGTCTCTGACAGGCCGCTGTTCGCTGCCGATTTCgctcattttttaaaaactctcctcactgctcgtCTCTGccggcattttaaacatggcggctgaacTCCAGCCAATCACTTTCTGTGGAGACGACTTCACCCGCCCCGGCCGTGACGTCACTGGGTCTTAGGTTCCAGACcggcaagtttttggtgccagaaaaagcggCTCCGCGGCACCGAGCCGGGTCTCATGGGGGGAAAAGCagaaaatggttccaaattaggcaccggctgctgtcggtggaaaagcgctaagaGAGGCCCAGCACAACCACAGACCACTGCCACCCAAGCCCCTGCAGCAGGAACTCGGGCTGGACTTCCACCACTATAGGAAGAGTCAACtattttctgtaatataaaaaagctatatatttttgGGGAATGGAACTCTGAAACTTTTTCTTGTTCTGGAAGCGGAAGAAAAACCAAACACTGGAAACCGACTGAACGgttaaagcaacaaaaaaatatatataagaggGAGAACTGCATCTATTTAATCGATCAGGTTTTGTGAATAAATGtggcattgttgttttttaaaggaaatgttcatatttattttctgtctctaATGTTGTCGTTGTTCTACCTTTTTCTTGCTGCCATTGCTTTCTTTTCCagtgcctgtttgttttgtgatcaCTGAATGCACATGCTGGAGAACAGTCTTACAGATATCAGCGACTGTAGAGATACATTAAGTgtaagagaaataataataagtggaGACAATGATTATGATAATTTGTTACTATCATACTGAGCCAAAACAACTAGACAGGTACACTGACTGGCAAGCAAACTGTATTCCAGACAGCCACGTTCTTGTGTACGGCTGAAGGTCACTGGTGTTCAGAGCACTGAACTgtagaaaatattgtttgtcaGAATGCATTACATTCGCCCTACCCTTGTGCAGTGCTAATGGTCAGATCACAGCTTGTCAACTGTTACACAACACTGAGAAATCTTTACAGAATCACAGAGAATAAGTAATGGGGGTTGCTGGGAATTTCCACAGCCAGATTCAATTGGTGGAGAACATTGATTCTTCCGACGTCTAAAATGCAAAGCTGTTTTTaaggtccttgtttttttaactcgTCCAAAGTATTGTCACTCTTTCAGactctttaaagaaaaaaacaaatccatttgcATTGCCTCTTGTGCAGCAGCCCAAGTCAATTTGCATTCCCACCACCTGTCTCTCAGTACTCAGACGTTAAACAGCCTGACCACGGGTTCAAAGGAAGGACATATGGACAGTATTTAGGCTGTTGTGGTCAGTGTAACTCCCACACACGCTGGAATGAAAGAGATACCATCGGAGTATCAAACTGGGTCTTTGAGCAACAACAGTATTTCAGGAAACTGCAGGATTTGCTTTTTTATAAAAGTGGTGATGCCTGATgggaaagcttttttttaaatagttctcCTAAAACGACACCGTGTAATATAAAGCTCTCGCGACAGGAGCAGATCCACTTGGGTATATCAGCCGTTATATTTACAGTGCaacattgaaaaacacacgcagtGCTTTCTCACAGGACTGCCTATTGTTGTAGAGTTCACTCAGTAACTTTGACCAGTTACCACTACAGTGCGTGTTCAACAGCGCTGTGTTTGGACAGTTGTGATGAAACCAGGCACACCCGCTTGGTTCAGATTGTGTCCAcgtcggtgtgtgtgtgaatatcaGTGTCAGCTCCATTACTTTGAATAAGGCCGTTGATGttggtttttaaaatgcaaaacaaaaatgctgatACCTAGCATTACAAAAACtatattcttaaattatttgcaatgttttagaaagtttatttttgtgtttcatatcTGTGACCTGTAAGTATATTGTGATCATTTAATGTCTTGTACAAGAGACTATGGGGGCTTGCTAGTCAATGGTTGTGGGTCGAATTTCTATTACCAGTTTGTTCTTTGAAAAAGGGAAAGAGGAAATAATGCCAATGACAATTCCAAAGTCTTACATACtgtcatatatacatatattttggtCATATCCTATAACCACAAACAtctcaaatgtatgttttgattcacagctgtttgtgtaaataaaaataccccATTGTCTTGctatttttcacttttctcTGGAGCACAAACTATATTATtacagatattttttaaatggggtTAATGAGGCCCTTAGAGCCTCCACACCCACTTGGCAATTGTGTGAAAGCACCAACAGCTGTTTAaccattaaaacagtttttcttgtttacagTTTGctgtttggaaaacaaaaaaatacaattaaaaacacctttttaagTAAA

Function

GO: NA

KEGG:

id description
K01415 ECE; endothelin-converting enzyme

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU151682 lncRNA downstream 82001 4567439 ~ 4569294 (-) True G121039
TU151590 lncRNA downstream 563877 4087108 ~ 4087418 (-) True G120975
TU151516 lncRNA downstream 946931 3700492 ~ 3704364 (-) True G120914
TU151434 lncRNA downstream 1110469 3538762 ~ 3540826 (-) True G120853
TU151429 lncRNA downstream 1114770 3535822 ~ 3536525 (-) True G120849
TU151778 lncRNA upstream 43240 4716592 ~ 4722181 (-) True G121111
TU151835 lncRNA upstream 437250 5110602 ~ 5116017 (-) True G121151
TU151836 lncRNA upstream 454686 5128038 ~ 5137006 (-) True G121152
TU151881 lncRNA upstream 554322 5227674 ~ 5228131 (-) True G121188
TU151991 lncRNA upstream 1184649 5858001 ~ 5861642 (-) True G121271
AMCG00002138 mRNA downstream 14803 4602406 ~ 4636492 (-) True AMCG00002138
AMCG00002139 mRNA downstream 51181 4594152 ~ 4600114 (-) True AMCG00002139
AMCG00002136 mRNA downstream 72123 4570976 ~ 4579172 (-) True AMCG00002136
AMCG00002132 mRNA downstream 228019 4414282 ~ 4423276 (-) True AMCG00002132
AMCG00002131 mRNA downstream 397898 4220002 ~ 4253397 (-) True AMCG00002131
AMCG00002141 mRNA upstream 68137 4741489 ~ 4747439 (-) True AMCG00002141
AMCG00002142 mRNA upstream 75816 4749168 ~ 4752332 (-) True AMCG00002142
AMCG00002144 mRNA upstream 124037 4797389 ~ 4811362 (-) True AMCG00002144
AMCG00002154 mRNA upstream 528066 5201418 ~ 5214408 (-) True AMCG00002154
AMCG00002153 mRNA upstream 579023 5252375 ~ 5254786 (-) True AMCG00002153
TU151612 other downstream 431418 4214715 ~ 4219877 (-) True G120993
TU151529 other downstream 864751 3784236 ~ 3786544 (-) True G120927
TU151499 other downstream 935043 3713867 ~ 3716252 (-) True G120907
TU151364 other downstream 1523351 3113442 ~ 3127944 (-) True AMCG00002094
TU151301 other downstream 1646378 2995508 ~ 3004917 (-) True G120748
TU152605 other upstream 3163143 7836495 ~ 7839411 (-) True AMCG00002223
TU153137 other upstream 5158559 9831911 ~ 9833224 (-) True AMCG00002276
TU153139 other upstream 5168743 9842095 ~ 9853075 (-) False AMCG00002279
TU153575 other upstream 6851541 11524893 ~ 11527355 (-) False AMCG00002317
TU153660 other upstream 6994403 11667755 ~ 11685089 (-) False AMCG00002327

Expression Profile