RNA id: AMCG00002190


Basic Information

Item Value
RNA id AMCG00002190
length 267
RNA type mRNA
GC content 0.62
exon number 2
gene id AMCG00002190
representative False

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 6586654 ~ 6602608 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGACCTTCACCAGCAACAAGTCCATGGAGATCGAGGTGTTTGTGGACGCCGACCCCCTAGTGGAGGCGGCCAGGGGGAAGTACCGGGCCGTCACCGCCTTCTTCACCTACATCTCCCTGGATAAGGAGGGAAAGCCACTGTCTGTCCCGCCACTCAAGTCCTGCAAGCTTCCTCTCAACACGCTGGCCCGTGTCCCGGCAGTGGAGGCACCTCCGGGCTGCTGTCTGCGCGACGTTTCTTGCAGCAGCTGGAGCCACGCCACCTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU152177 lncRNA upstream 259440 6327197 ~ 6327481 (+) True G121417
TU152159 lncRNA upstream 309021 6277518 ~ 6277900 (+) True G121402
TU151928 lncRNA upstream 1016674 5474136 ~ 5570247 (+) True G121228
TU151892 lncRNA upstream 1310998 5243709 ~ 5275923 (+) True G121198
TU151880 lncRNA upstream 1358822 5227674 ~ 5228099 (+) True G121187
TU152324 lncRNA downstream 204361 6792976 ~ 6798043 (+) True G121526
TU152516 lncRNA downstream 972451 7561066 ~ 7562732 (+) True G121680
TU152524 lncRNA downstream 1058103 7646718 ~ 7648316 (+) True G121688
TU152562 lncRNA downstream 1241192 7829807 ~ 7834211 (+) True G121722
TU152587 lncRNA downstream 1321943 7910558 ~ 7917243 (+) True G121741
AMCG00002189 mRNA upstream 33447 6537081 ~ 6553474 (+) True AMCG00002189
AMCG00002188 mRNA upstream 64697 6520509 ~ 6522224 (+) True AMCG00002188
AMCG00002186 mRNA upstream 162658 6402910 ~ 6424263 (+) True AMCG00002186
AMCG00002182 mRNA upstream 201139 6383055 ~ 6385782 (+) True AMCG00002182
AMCG00002179 mRNA upstream 226277 6356405 ~ 6360644 (+) True AMCG00002179
AMCG00002192 mRNA downstream 47319 6635934 ~ 6655887 (+) True AMCG00002192
AMCG00002194 mRNA downstream 125492 6714107 ~ 6725801 (+) True AMCG00002194
AMCG00002195 mRNA downstream 185308 6773923 ~ 6785974 (+) True AMCG00002195
AMCG00002202 mRNA downstream 522162 7110777 ~ 7119186 (+) True AMCG00002202
AMCG00002203 mRNA downstream 531964 7120579 ~ 7128460 (+) True AMCG00002203
TU151873 other upstream 1363423 5218830 ~ 5223498 (+) True AMCG00002152
TU151430 other upstream 3047367 3537619 ~ 3539554 (+) False AMCG00002098
TU151426 other upstream 3050493 3533814 ~ 3536428 (+) False AMCG00002098
TU151290 other upstream 3627446 2956908 ~ 2959475 (+) True G120742
TU151011 other upstream 4646105 1924022 ~ 1940816 (+) True G120518
TU152502 other downstream 805185 7393800 ~ 7396561 (+) False AMCG00002215
TU152752 other downstream 2165111 8753726 ~ 8762079 (+) False AMCG00002245
TU153130 other downstream 3255665 9844280 ~ 9851306 (+) False AMCG00002272
TU153133 other downstream 3255665 9844280 ~ 9849012 (+) False AMCG00002272
TU153306 other downstream 3979297 10567912 ~ 10594304 (+) False AMCG00002294

Expression Profile