RNA id: AMCG00002196



Basic Information


Item Value
RNA id AMCG00002196
length 201
RNA type mRNA
GC content 0.51
exon number 1
gene id AMCG00002196
representative True

Chromosome Information


Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 6712997 ~ 6713197 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCCAACGCGCTATTCTGGCGCAGGCATTGACCCCGCCATCTGCAAGACTGCATTGAAGCTGAAACCCAAGAAGGTGGTGGAGCAGAAGGGCAATTACTTCATGGTGAAAACATTGAGCCCCTTCAGGAACTACACCATTGGTTCCCTTGTGGGCGAGGAGTACACCAAAGGAGAAATATCTCCCCCTCCATTAGAGTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU152218 lncRNA downstream 288699 6420041 ~ 6424298 (-) True G121447
TU152216 lncRNA downstream 299723 6413013 ~ 6413274 (-) True G121445
TU152215 lncRNA downstream 305082 6407705 ~ 6407915 (-) True G121444
TU152212 lncRNA downstream 327078 6382433 ~ 6385919 (-) False G121443
TU152525 lncRNA upstream 847880 7561077 ~ 7562747 (-) True G121689
TU152556 lncRNA upstream 944635 7657832 ~ 7658851 (-) True G121716
TU152558 lncRNA upstream 949789 7662986 ~ 7663677 (-) True G121718
TU152604 lncRNA upstream 1116996 7830193 ~ 7845316 (-) True G121754
TU152667 lncRNA upstream 1302867 8016064 ~ 8017075 (-) True G121789
AMCG00002198 mRNA downstream 6473 6683032 ~ 6706524 (-) True AMCG00002198
AMCG00002193 mRNA downstream 45546 6666114 ~ 6667451 (-) True AMCG00002193
AMCG00002191 mRNA downstream 212725 6451274 ~ 6500272 (-) True AMCG00002191
AMCG00002187 mRNA downstream 265378 6428365 ~ 6447619 (-) True AMCG00002187
AMCG00002185 mRNA downstream 331566 6357657 ~ 6381431 (-) True AMCG00002185
AMCG00002197 mRNA upstream 16437 6729634 ~ 6735812 (-) True AMCG00002197
AMCG00002199 mRNA upstream 72930 6786127 ~ 6792271 (-) True AMCG00002199
AMCG00002200 mRNA upstream 84690 6797887 ~ 6824699 (-) True AMCG00002200
AMCG00002201 mRNA upstream 210801 6923998 ~ 6939545 (-) True AMCG00002201
AMCG00002208 mRNA upstream 362552 7075749 ~ 7086413 (-) True AMCG00002208
TU151612 other downstream 2493120 4214715 ~ 4219877 (-) True G120993
TU151529 other downstream 2926453 3784236 ~ 3786544 (-) True G120927
TU151499 other downstream 2996745 3713867 ~ 3716252 (-) True G120907
TU151364 other downstream 3585053 3113442 ~ 3127944 (-) True AMCG00002094
TU151301 other downstream 3708080 2995508 ~ 3004917 (-) True G120748
TU152605 other upstream 1123298 7836495 ~ 7839411 (-) True AMCG00002223
TU153137 other upstream 3118714 9831911 ~ 9833224 (-) True AMCG00002276
TU153139 other upstream 3128898 9842095 ~ 9853075 (-) False AMCG00002279
TU153575 other upstream 4811696 11524893 ~ 11527355 (-) False AMCG00002317
TU153660 other upstream 4954558 11667755 ~ 11685089 (-) False AMCG00002327

Expression Profile