Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00002247 |
| length | 1179 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 8 |
| gene id | AMCG00002247 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 8898625 ~ 8903588 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0043603 | cellular amide metabolic process | biological_process |
| GO:0043604 | amide biosynthetic process | biological_process |
| GO:1901566 | organonitrogen compound biosynthetic process | biological_process |
| GO:0009059 | macromolecule biosynthetic process | biological_process |
| GO:0043043 | peptide biosynthetic process | biological_process |
| GO:0006412 | translation | biological_process |
| GO:0044267 | cellular protein metabolic process | biological_process |
| GO:0006518 | peptide metabolic process | biological_process |
| GO:0034645 | cellular macromolecule biosynthetic process | biological_process |
| id | description |
|---|---|
| ko03010 | Ribosome |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU152811 | lncRNA | downstream | 27927 | 8868645 ~ 8870698 (-) | True | G121885 |
| TU152800 | lncRNA | downstream | 39622 | 8825431 ~ 8859003 (-) | True | G121875 |
| TU152667 | lncRNA | downstream | 881550 | 8016064 ~ 8017075 (-) | True | G121789 |
| TU152604 | lncRNA | downstream | 1053309 | 7830193 ~ 7845316 (-) | True | G121754 |
| TU152558 | lncRNA | downstream | 1234948 | 7662986 ~ 7663677 (-) | True | G121718 |
| TU152845 | lncRNA | upstream | 28575 | 8932163 ~ 8933163 (-) | True | G121912 |
| TU152874 | lncRNA | upstream | 114538 | 9018126 ~ 9018327 (-) | True | G121935 |
| TU152969 | lncRNA | upstream | 234859 | 9138447 ~ 9213429 (-) | True | G122019 |
| TU152989 | lncRNA | upstream | 380381 | 9283969 ~ 9287587 (-) | True | G122037 |
| TU153015 | lncRNA | upstream | 708474 | 9612062 ~ 9614287 (-) | False | AMCG00002265 |
| AMCG00002240 | mRNA | downstream | 85034 | 8810319 ~ 8813591 (-) | True | AMCG00002240 |
| AMCG00002239 | mRNA | downstream | 178508 | 8712465 ~ 8720117 (-) | True | AMCG00002239 |
| AMCG00002238 | mRNA | downstream | 189688 | 8706529 ~ 8708937 (-) | True | AMCG00002238 |
| AMCG00002237 | mRNA | downstream | 375795 | 8496082 ~ 8522830 (-) | True | AMCG00002237 |
| AMCG00002234 | mRNA | downstream | 871601 | 8022677 ~ 8027024 (-) | True | AMCG00002234 |
| AMCG00002249 | mRNA | upstream | 30381 | 8933969 ~ 8946187 (-) | True | AMCG00002249 |
| AMCG00002251 | mRNA | upstream | 53522 | 8957110 ~ 8982144 (-) | True | AMCG00002251 |
| AMCG00002252 | mRNA | upstream | 92114 | 8995702 ~ 9005887 (-) | True | AMCG00002252 |
| AMCG00002248 | mRNA | upstream | 115019 | 9018607 ~ 9022271 (-) | True | AMCG00002248 |
| AMCG00002250 | mRNA | upstream | 151726 | 9055314 ~ 9061095 (-) | True | AMCG00002250 |
| TU152605 | other | downstream | 1059214 | 7836495 ~ 7839411 (-) | True | AMCG00002223 |
| TU151612 | other | downstream | 4678748 | 4214715 ~ 4219877 (-) | True | G120993 |
| TU151529 | other | downstream | 5112081 | 3784236 ~ 3786544 (-) | True | G120927 |
| TU151499 | other | downstream | 5182373 | 3713867 ~ 3716252 (-) | True | G120907 |
| TU151364 | other | downstream | 5770681 | 3113442 ~ 3127944 (-) | True | AMCG00002094 |
| TU153137 | other | upstream | 928323 | 9831911 ~ 9833224 (-) | True | AMCG00002276 |
| TU153139 | other | upstream | 938507 | 9842095 ~ 9853075 (-) | False | AMCG00002279 |
| TU153575 | other | upstream | 2621305 | 11524893 ~ 11527355 (-) | False | AMCG00002317 |
| TU153660 | other | upstream | 2764167 | 11667755 ~ 11685089 (-) | False | AMCG00002327 |
| TU153720 | other | upstream | 2828029 | 11731617 ~ 11734324 (-) | True | G122597 |
