RNA id: AMCG00002260



Basic Information


Item Value
RNA id AMCG00002260
length 231
RNA type mRNA
GC content 0.54
exon number 1
gene id AMCG00002260
representative True

Chromosome Information


Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 9193199 ~ 9193429 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGAGGCTGCCCAGGTTCCAGGCAGGGCTGAGCTGATTGCTGTTTCTTGCCTACAGGAGGTGATCAGGGAGGGGTCAGAGCAGATGTCCGCGGTCCTGGGCTGGGATGCTGTGAAAACGGACAACTTGCTACAGGCCTGTGAAGACGAACTGGACCAACGTttaaagcaagtgaatgccatgCAATCCCTCCACTCCTGCAAATGTATCATGGCCAAGGACAACAACTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU152874 lncRNA downstream 174872 9018126 ~ 9018327 (-) True G121935
TU152845 lncRNA downstream 260036 8932163 ~ 8933163 (-) True G121912
TU152811 lncRNA downstream 322501 8868645 ~ 8870698 (-) True G121885
TU152800 lncRNA downstream 334196 8825431 ~ 8859003 (-) True G121875
TU152667 lncRNA downstream 1176124 8016064 ~ 8017075 (-) True G121789
TU152989 lncRNA upstream 90540 9283969 ~ 9287587 (-) True G122037
TU153015 lncRNA upstream 418633 9612062 ~ 9614287 (-) False AMCG00002265
TU153025 lncRNA upstream 427599 9621028 ~ 9621472 (-) True G122061
TU153107 lncRNA upstream 563996 9757425 ~ 9775995 (-) False AMCG00002275
TU153141 lncRNA upstream 654806 9848235 ~ 9851376 (-) True G122131
AMCG00002250 mRNA downstream 132104 9055314 ~ 9061095 (-) True AMCG00002250
AMCG00002248 mRNA downstream 170928 9018607 ~ 9022271 (-) True AMCG00002248
AMCG00002252 mRNA downstream 187312 8995702 ~ 9005887 (-) True AMCG00002252
AMCG00002251 mRNA downstream 211055 8957110 ~ 8982144 (-) True AMCG00002251
AMCG00002249 mRNA downstream 247012 8933969 ~ 8946187 (-) True AMCG00002249
AMCG00002259 mRNA upstream 7157 9200586 ~ 9208699 (-) True AMCG00002259
AMCG00002263 mRNA upstream 115987 9309416 ~ 9356970 (-) True AMCG00002263
AMCG00002265 mRNA upstream 415321 9608750 ~ 9620127 (-) True AMCG00002265
AMCG00002271 mRNA upstream 435221 9628650 ~ 9629679 (-) True AMCG00002271
AMCG00002267 mRNA upstream 436701 9630130 ~ 9637266 (-) True AMCG00002267
TU152605 other downstream 1353788 7836495 ~ 7839411 (-) True AMCG00002223
TU151612 other downstream 4973322 4214715 ~ 4219877 (-) True G120993
TU151529 other downstream 5406655 3784236 ~ 3786544 (-) True G120927
TU151499 other downstream 5476947 3713867 ~ 3716252 (-) True G120907
TU151364 other downstream 6065255 3113442 ~ 3127944 (-) True AMCG00002094
TU153137 other upstream 638482 9831911 ~ 9833224 (-) True AMCG00002276
TU153139 other upstream 648666 9842095 ~ 9853075 (-) False AMCG00002279
TU153575 other upstream 2331464 11524893 ~ 11527355 (-) False AMCG00002317
TU153660 other upstream 2474326 11667755 ~ 11685089 (-) False AMCG00002327
TU153720 other upstream 2538188 11731617 ~ 11734324 (-) True G122597

Expression Profile