RNA id: AMCG00002271



Basic Information


Item Value
RNA id AMCG00002271
length 312
RNA type mRNA
GC content 0.55
exon number 2
gene id AMCG00002271
representative True

Chromosome Information


Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 9628650 ~ 9629679 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGACCCTGCTGTCCAGTGTGCTCCCCGTGGCTCTCCTGGTGTGGAGTGTGAGGCCAGCTGTGCCTTTGCCTATCGAAGAGAGACTGGCTCTGCAGAGCAATGGGGACTTggctaaagaaagaaaagattttCTTCTGAAGATTTTGTCTGGACTGTCTGATTTTAACGGGCTGGGGAAAGAGCTCTCGGGTGGGGATCGGGAGCCGCTCAAGTTGTCCCAGCTGGGGGAGAGGTCCCTGTACAGCCAGCCTGTGACCCGAGAGAGAACTCCCTGTAAGAACTTCTTCTGGAAGACGTTCTCCTCCTGCTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU153025 lncRNA downstream 7178 9621028 ~ 9621472 (-) True G122061
TU153015 lncRNA downstream 14363 9612062 ~ 9614287 (-) False AMCG00002265
TU152989 lncRNA downstream 341063 9283969 ~ 9287587 (-) True G122037
TU152969 lncRNA downstream 415221 9138447 ~ 9213429 (-) True G122019
TU152874 lncRNA downstream 610323 9018126 ~ 9018327 (-) True G121935
TU153107 lncRNA upstream 127746 9757425 ~ 9775995 (-) False AMCG00002275
TU153141 lncRNA upstream 218556 9848235 ~ 9851376 (-) True G122131
TU153259 lncRNA upstream 593534 10223213 ~ 10224982 (-) True G122226
TU153264 lncRNA upstream 650073 10279752 ~ 10279984 (-) False AMCG00002288
TU153358 lncRNA upstream 1120732 10750411 ~ 10750781 (-) True G122302
AMCG00002265 mRNA downstream 8523 9608750 ~ 9620127 (-) True AMCG00002265
AMCG00002263 mRNA downstream 271680 9309416 ~ 9356970 (-) True AMCG00002263
AMCG00002259 mRNA downstream 419951 9200586 ~ 9208699 (-) True AMCG00002259
AMCG00002260 mRNA downstream 435221 9193199 ~ 9193429 (-) True AMCG00002260
AMCG00002250 mRNA downstream 567555 9055314 ~ 9061095 (-) True AMCG00002250
AMCG00002267 mRNA upstream 451 9630130 ~ 9637266 (-) True AMCG00002267
AMCG00002270 mRNA upstream 13567 9643246 ~ 9650610 (-) True AMCG00002270
AMCG00002269 mRNA upstream 31829 9661508 ~ 9692975 (-) True AMCG00002269
AMCG00002268 mRNA upstream 64081 9693760 ~ 9725266 (-) True AMCG00002268
AMCG00002275 mRNA upstream 127934 9757613 ~ 9801108 (-) True AMCG00002275
TU152605 other downstream 1789239 7836495 ~ 7839411 (-) True AMCG00002223
TU151612 other downstream 5408773 4214715 ~ 4219877 (-) True G120993
TU151529 other downstream 5842106 3784236 ~ 3786544 (-) True G120927
TU151499 other downstream 5912398 3713867 ~ 3716252 (-) True G120907
TU151364 other downstream 6500706 3113442 ~ 3127944 (-) True AMCG00002094
TU153137 other upstream 202232 9831911 ~ 9833224 (-) True AMCG00002276
TU153139 other upstream 212416 9842095 ~ 9853075 (-) False AMCG00002279
TU153575 other upstream 1895214 11524893 ~ 11527355 (-) False AMCG00002317
TU153660 other upstream 2038076 11667755 ~ 11685089 (-) False AMCG00002327
TU153720 other upstream 2101938 11731617 ~ 11734324 (-) True G122597

Expression Profile