RNA id: AMCG00002286


Basic Information

Item Value
RNA id AMCG00002286
length 474
RNA type mRNA
GC content 0.60
exon number 2
gene id AMCG00002286
representative True

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 10024419 ~ 10030406 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCAACAGATCACTTAAAAGTGATCAATCTCAGGCGGGTGAAGAGACCCTACAGACCCCCCTCGGGGCCCTACCTGCCGGGGAAGCCTTGTCTGAACTATGCGGATCCTTATTACTTGCACCAGGCGCCGAAGTACTTGCAGGCGCCCTTTGGCAGTAACTCCTGGTCTCTGGGACAGTCCAGCCCGTCCATGAGCTACCAGCACCCCCAGCCCGGCAACGGGGGAGGCAGCCCTGTGTCCATGAACGGCTACTGCAGCTCCCCGGTGAACGGATACGCCAGCCACCACCTGCACCCGTCCTATAGCGCTTACCACCGACACCAGGGTCTTCTGGTGTCCCACTCGGGCGGGTCCTACACGGGCATCACTCAGCCCATCAGTCCCGGCGGAGCCTCGGCGTCACCCGGCGGCTTTCACCAGCTGTCCGGctccagacagacagaaatgtCGCTGATGCATTATTATGATTGA

Function

GO:

id name namespace
GO:0008233 peptidase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU153141 lncRNA downstream 173043 9848235 ~ 9851376 (-) True G122131
TU153107 lncRNA downstream 248424 9757425 ~ 9775995 (-) False AMCG00002275
TU153025 lncRNA downstream 402947 9621028 ~ 9621472 (-) True G122061
TU153015 lncRNA downstream 410132 9612062 ~ 9614287 (-) False AMCG00002265
TU152989 lncRNA downstream 736832 9283969 ~ 9287587 (-) True G122037
TU153259 lncRNA upstream 192807 10223213 ~ 10224982 (-) True G122226
TU153264 lncRNA upstream 249346 10279752 ~ 10279984 (-) False AMCG00002288
TU153358 lncRNA upstream 720005 10750411 ~ 10750781 (-) True G122302
TU153380 lncRNA upstream 781780 10812186 ~ 10813876 (-) True G122319
TU153396 lncRNA upstream 807398 10837804 ~ 10847201 (-) False AMCG00002301
AMCG00002280 mRNA downstream 17848 9977776 ~ 10006571 (-) True AMCG00002280
AMCG00002279 mRNA downstream 180093 9836918 ~ 9844326 (-) True AMCG00002279
AMCG00002276 mRNA downstream 191331 9830519 ~ 9833088 (-) False AMCG00002276
AMCG00002277 mRNA downstream 217121 9802308 ~ 9807298 (-) True AMCG00002277
AMCG00002275 mRNA downstream 223311 9757613 ~ 9801108 (-) True AMCG00002275
AMCG00002285 mRNA upstream 36506 10066912 ~ 10076666 (-) True AMCG00002285
AMCG00002283 mRNA upstream 48751 10079157 ~ 10093103 (-) True AMCG00002283
AMCG00002282 mRNA upstream 159357 10189763 ~ 10197544 (-) True AMCG00002282
AMCG00002281 mRNA upstream 194882 10225288 ~ 10239533 (-) True AMCG00002281
AMCG00002284 mRNA upstream 209686 10240092 ~ 10244785 (-) True AMCG00002284
TU153139 other downstream 171344 9842095 ~ 9853075 (-) False AMCG00002279
TU153137 other downstream 191195 9831911 ~ 9833224 (-) True AMCG00002276
TU152605 other downstream 2185008 7836495 ~ 7839411 (-) True AMCG00002223
TU151612 other downstream 5804542 4214715 ~ 4219877 (-) True G120993
TU151529 other downstream 6237875 3784236 ~ 3786544 (-) True G120927
TU153575 other upstream 1494487 11524893 ~ 11527355 (-) False AMCG00002317
TU153660 other upstream 1637349 11667755 ~ 11685089 (-) False AMCG00002327
TU153720 other upstream 1701211 11731617 ~ 11734324 (-) True G122597
TU153763 other upstream 1818064 11848470 ~ 11854891 (-) True AMCG00002350
TU153773 other upstream 1841456 11871862 ~ 11872862 (-) False AMCG00002351

Expression Profile