RNA id: AMCG00002291


Basic Information

Item Value
RNA id AMCG00002291
length 2190
RNA type mRNA
GC content 0.55
exon number 14
gene id AMCG00002291
representative True

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 10399661 ~ 10425473 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTACCGAATGCCGTCCACCGTGTGCTCAGCACCGCTGGCCTCCAGGTCCATGCCCCCCCAGTGCAGGTCACTGGGACTGTCAGCCATTGCTGATGCTCTGTTCTGCACTGCTCTAGCTGCCATGGCTATGACTGATGCCTCCTCCCACAAGCCACAGACGCGCCTCTCTGCGCGTCGCGTGAGCCCGGCTCAGCCAATCAGGCTGCGAGGAGGCCGTGCGCGCGGCCGCGTCCCGGGGATATGGGCCAGCGCGAGCGCCGCCGCGTCTGTCCGcgcggagagagagagcgagctgTCCTTGCCTCACCTTACCTTCCCGGCCCGCACCTCGCTGAACCAGACGATACCTCCATTTTCTTACAGAACCATCATGTCCATTCTGTCGATCACTGCTCGGGAGATATTTGACTCCCGTGGAAATCCCACTGTGGAAGTCGACCTCTACACCAAGAAAGTTCCCAGCGGTGCTTCTACGGGAATCTACGAGGCTCTGGAACTCCGTGACAAGGACAAGACCCGTTACATGGGGAAAGGGGTGGGCAGAGctgttaaatatgttaatgagtTCTTGGGACCAGCTTTGTGTAATCAGaatgtgTCTGTCATCGAGCAAGAGAAGATTGACAAACTGATGATTGCCATGGATGGCACAGAGAACAAATCCAAGTTTGGTGCCAATGCTATCCTGGGTGTGTCTCTGGCTGTGTGCAAGGCTGGTGCTGCGGAGAAAGGTGTCCCCCTGTACCGCCACATTGCCGATTTGGCTGGAAATCCAGAAGTCATCCTCCCAGTTCCTgCTTTTAACGTGATCAATGGCGGCTCCCATGCTGGCAACAAGCTGGCAATGCAGGAGTTCATGATCCTGCCTGTGGGCGCGAGCAGCTTCAAGGAGGCCATGCGCATCGGGGCCGAGATCTACCACACCCTGAAGGACGTCATCAAGGCGAAGTATGGCAAGGACGCCACCAACGTGGGAGACGAGGGTGGCTTTGCTCCCAACATCCTGGAGAACAAGGAAGCCCTGGAACTCCTGAAGAATGCCATCGCCAAGGCTGGCTACACCGACAAGATCGTGATTGGGATGGACGTGGCTGCCTCAGAGTTCTATAAGGACGGCAAGTACGACCTGGACTTCAAGTCCCCCGATGACCCCAGCCGCTACATCACCCCCGACCAACTGGCTGACCTGTACAAGGGCTTTGTCAAGGACTACCCAGTGGTCTCTATCGAAGATCCATTTGACCAGGATGACTGGGCAGCTTGGTCCAATTTCACCGGCAGCACCTCCATCCAGGTGGTGGGTGACGATCTGACAGTGACCAACCCCAAGCGCATCTCCAAGGCCGTGACAGAGAAGGCCTGTAACTGCCTGCTGCTGAAGGTCAACCAGATCGGCTCCGTCACCGAGTCACTGCAGGCCTGCAAGATGGCGCAGTCCAGCGGCTGGGGGGTGATGGTCAGTCACCGCTCCGGGGAGACCGAGGACACCTTCATTGCTGACCTGGTAGTGGGACTCTGCACTGGTCAGATCAAGACCGGAGCTCCCTGCCGATCAGAGCGCCTGGCCAAGTACAACCAGATTCTCAGGATTGAAGAGGAGCTGGGAGATGCAGCTCGTTTCGCAGGCAAGAACTTCAGGAACCCTCTCATCAACTAAAGAGTGCTTCCACCGGCCTTACTGTTCAATCTCTCCTGTTCACACTCATCCACATACATGTGCACGCACACTATAGTTCACCTGTTCCTGGACAGAGGGGCTGCTGGAAGGGGTCACATGGACGCCCAAGGTCCAAGTCCTTAAAGCCATCGCAAGGAACTACCCTTCCCACCACCCCACCACCCCTGTGTGCAGTCTACTGCCCCCCAGGCTTTGGCTTCTCGATAGGCTTAGTCCCTcagtatgtgtattatttttgtatcgTCTGAGAGATCCTAGTTTTCCTGTGTGAGTCATCGTGATAGTCAGTCTCCTGATATAATCTATTTTAGTAAAGAGCAAAGTctatactgtacagtactgtgtgtgcAATGTGTCCTATCTGAGCAGCTCTAGTGTTGCTGTATGTGTGGCGAATTAAAAACCTACTCCCTTCAGCGGTCACAAATGtgcttgtatttattgcattctGATGTGAAATAGCTGAAACGTGAGAACATGCTTGTATAAACCGCACTGAGACAGCTGCTG

Function

GO:

id name namespace
GO:0006096 glycolytic process biological_process
GO:0000015 phosphopyruvate hydratase complex cellular_component
GO:0004634 phosphopyruvate hydratase activity molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG:

id description
K01689 ENO, eno; enolase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU153270 lncRNA upstream 73010 10323529 ~ 10326651 (+) True G122236
TU153225 lncRNA upstream 267461 10079747 ~ 10132200 (+) True G122198
TU153135 lncRNA upstream 500781 9862956 ~ 9898880 (+) True G122126
TU153132 lncRNA upstream 550649 9844280 ~ 9849012 (+) False AMCG00002272
TU153125 lncRNA upstream 568983 9829754 ~ 9830678 (+) True G122119
TU153350 lncRNA downstream 327205 10752678 ~ 10753881 (+) False AMCG00002296
TU153390 lncRNA downstream 445300 10870773 ~ 10927943 (+) True G122328
TU153467 lncRNA downstream 909458 11334931 ~ 11348638 (+) True G122389
TU153478 lncRNA downstream 933488 11358961 ~ 11359521 (+) False AMCG00002310
TU153482 lncRNA downstream 940141 11365614 ~ 11367895 (+) False AMCG00002311
AMCG00002289 mRNA upstream 7000 10384425 ~ 10392661 (+) True AMCG00002289
AMCG00002290 mRNA upstream 22899 10366149 ~ 10376762 (+) True AMCG00002290
AMCG00002287 mRNA upstream 95300 10301307 ~ 10304361 (+) True AMCG00002287
AMCG00002278 mRNA upstream 427996 9951006 ~ 9971665 (+) True AMCG00002278
AMCG00002273 mRNA upstream 525567 9873347 ~ 9874094 (+) True AMCG00002273
AMCG00002293 mRNA downstream 31851 10457324 ~ 10541658 (+) True AMCG00002293
AMCG00002295 mRNA downstream 125194 10550667 ~ 10558464 (+) True AMCG00002295
AMCG00002294 mRNA downstream 162922 10588395 ~ 10604839 (+) True AMCG00002294
AMCG00002297 mRNA downstream 242219 10667692 ~ 10670647 (+) True AMCG00002297
AMCG00002298 mRNA downstream 267590 10693063 ~ 10709309 (+) True AMCG00002298
TU153130 other upstream 548355 9844280 ~ 9851306 (+) False AMCG00002272
TU153133 other upstream 550649 9844280 ~ 9849012 (+) False AMCG00002272
TU152752 other upstream 1637582 8753726 ~ 8762079 (+) False AMCG00002245
TU152502 other upstream 3003100 7393800 ~ 7396561 (+) False AMCG00002215
TU152254 other upstream 3797053 6586654 ~ 6602608 (+) False AMCG00002190
TU153306 other downstream 142439 10567912 ~ 10594304 (+) False AMCG00002294
TU153483 other downstream 951467 11376940 ~ 11377738 (+) False AMCG00002311
TU153583 other downstream 1203539 11629012 ~ 11630892 (+) True G122482
TU153608 other downstream 1263127 11688600 ~ 11694165 (+) True AMCG00002331
TU153704 other downstream 1409966 11835439 ~ 11836169 (+) True G122582

Expression Profile