RNA id: AMCG00002310



Basic Information


Item Value
RNA id AMCG00002310
length 555
RNA type mRNA
GC content 0.57
exon number 4
gene id AMCG00002310
representative True

Chromosome Information


Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 11357552 ~ 11359840 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GAAAAGCTCAGAAGACTGAGGCAGATAAGGCTGAATGCACAGCGCAGACTGCATGACCCAGCAGAGAGGTGGAAATTACGACTGAAATTCTTAGAACAAGCGAAGAGCTACATCGGCGTTCCGTACAGCAAGAAGTATCACCAGCCTGGAACTCCAGAGTTTGAGTCTTCAGTGTTCCTGGACTGCTGTGGACTGGTCCGGCGGGTGGTCCGAGACCTGAGTGAGGATTTCGGCTTCTTCATCGGGCCCGGAAACCAGGCGTACCAGTTCGACACCCTGCCGCTCACCCTGGACAGCGAGGAGGCCATGAAGCCAGGGGACCTGGTGTTCATCTCGGGGACCTACTTCAACCCGCACATGAAAAGGCAGATCCATGACATGGTGCATGTGGAGATCTGGCTGGGGGACGGGCAGCGCACACTGGGAGCACGCTGGCAGAAGGGCGTGGTGCAGGTCTTTGACTCCTACTGCTTTGTCTCCTCCTCCTACGGGGACATGTGCTACCACTTCAAGTCCATCGAGACCTGGCTGGGCGGGGTGTGCGCCAGCTGCTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU153467 lncRNA upstream 8914 11334931 ~ 11348638 (+) True G122389
TU153390 lncRNA upstream 429609 10870773 ~ 10927943 (+) True G122328
TU153350 lncRNA upstream 603671 10752678 ~ 10753881 (+) False AMCG00002296
TU153270 lncRNA upstream 1030901 10323529 ~ 10326651 (+) True G122236
TU153225 lncRNA upstream 1225352 10079747 ~ 10132200 (+) True G122198
TU153482 lncRNA downstream 5774 11365614 ~ 11367895 (+) False AMCG00002311
TU153499 lncRNA downstream 97804 11457644 ~ 11470525 (+) True G122417
TU153564 lncRNA downstream 162334 11522174 ~ 11522631 (+) True G122467
TU153565 lncRNA downstream 163032 11522872 ~ 11523114 (+) True G122468
TU153566 lncRNA downstream 163387 11523227 ~ 11523622 (+) True G122469
AMCG00002307 mRNA upstream 86223 11255732 ~ 11271329 (+) True AMCG00002307
AMCG00002309 mRNA upstream 112572 11214084 ~ 11244980 (+) True AMCG00002309
AMCG00002308 mRNA upstream 155551 11144009 ~ 11202001 (+) True AMCG00002308
AMCG00002306 mRNA upstream 216865 11127459 ~ 11140687 (+) True AMCG00002306
AMCG00002305 mRNA upstream 255548 11097491 ~ 11102004 (+) True AMCG00002305
AMCG00002311 mRNA downstream 7726 11367566 ~ 11379568 (+) True AMCG00002311
AMCG00002314 mRNA downstream 33115 11392955 ~ 11406464 (+) True AMCG00002314
AMCG00002316 mRNA downstream 205169 11565009 ~ 11587894 (+) True AMCG00002316
AMCG00002323 mRNA downstream 242370 11602210 ~ 11612235 (+) True AMCG00002323
AMCG00002325 mRNA downstream 263941 11623781 ~ 11628341 (+) True AMCG00002325
TU153306 other upstream 763248 10567912 ~ 10594304 (+) False AMCG00002294
TU153130 other upstream 1506246 9844280 ~ 9851306 (+) False AMCG00002272
TU153133 other upstream 1508540 9844280 ~ 9849012 (+) False AMCG00002272
TU152752 other upstream 2595473 8753726 ~ 8762079 (+) False AMCG00002245
TU152502 other upstream 3960991 7393800 ~ 7396561 (+) False AMCG00002215
TU153483 other downstream 17100 11376940 ~ 11377738 (+) False AMCG00002311
TU153583 other downstream 269172 11629012 ~ 11630892 (+) True G122482
TU153608 other downstream 328760 11688600 ~ 11694165 (+) True AMCG00002331
TU153704 other downstream 475599 11835439 ~ 11836169 (+) True G122582
TU153909 other downstream 773946 12133786 ~ 12140465 (+) True G122746

Expression Profile