RNA id: AMCG00002322


Basic Information

Item Value
RNA id AMCG00002322
length 255
RNA type mRNA
GC content 0.56
exon number 2
gene id AMCG00002322
representative True

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 11531278 ~ 11532015 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCTGGGTACGGTCAGCAAGTCTGCGGGAGGTCCTGTCTCACTTACTGTCGCCTGAAGGGGAGCTGTGCTGCTTATGGAGATATTGAGTGCTCCAGCAAGACCCCAGACTCCACCGCACCAACACTGCCTGACTACCTAAGCCCCCCACCCATCAACCCCTCCCCCCATGCCCAGGATACAAGGAGCAGCTGCACCTGGTTTTTGCAGGATAGACTCAAGAAGAGGACAAGGGGCAGAGAACCAGAGAAGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU153524 lncRNA downstream 81487 11449566 ~ 11449791 (-) True G122438
TU153515 lncRNA downstream 121692 11407524 ~ 11409586 (-) True G122432
TU153446 lncRNA downstream 256751 11267564 ~ 11274527 (-) True G122376
TU153396 lncRNA downstream 684077 10837804 ~ 10847201 (-) False AMCG00002301
TU153380 lncRNA downstream 717402 10812186 ~ 10813876 (-) True G122319
TU153646 lncRNA upstream 69957 11601972 ~ 11628435 (-) True G122530
TU153665 lncRNA upstream 182394 11714409 ~ 11716145 (-) True G122548
TU153668 lncRNA upstream 186515 11718530 ~ 11718969 (-) True G122551
TU153761 lncRNA upstream 312377 11844392 ~ 11845671 (-) True G122632
TU153762 lncRNA upstream 315066 11847081 ~ 11848192 (-) True G122633
AMCG00002317 mRNA downstream 3360 11514000 ~ 11527918 (-) True AMCG00002317
AMCG00002318 mRNA downstream 21287 11505875 ~ 11509991 (-) True AMCG00002318
AMCG00002319 mRNA downstream 26032 11484759 ~ 11505246 (-) True AMCG00002319
AMCG00002315 mRNA downstream 63579 11459063 ~ 11467699 (-) True AMCG00002315
AMCG00002312 mRNA downstream 226433 11293094 ~ 11304845 (-) True AMCG00002312
AMCG00002321 mRNA upstream 1535 11533550 ~ 11541279 (-) True AMCG00002321
AMCG00002320 mRNA upstream 10676 11542691 ~ 11546457 (-) True AMCG00002320
AMCG00002328 mRNA upstream 80381 11612396 ~ 11620659 (-) True AMCG00002328
AMCG00002326 mRNA upstream 97134 11629149 ~ 11630909 (-) True AMCG00002326
AMCG00002327 mRNA upstream 115896 11647911 ~ 11680183 (-) True AMCG00002327
TU153575 other downstream 3923 11524893 ~ 11527355 (-) False AMCG00002317
TU153139 other downstream 1678203 9842095 ~ 9853075 (-) False AMCG00002279
TU153137 other downstream 1698054 9831911 ~ 9833224 (-) True AMCG00002276
TU152605 other downstream 3691867 7836495 ~ 7839411 (-) True AMCG00002223
TU151612 other downstream 7311401 4214715 ~ 4219877 (-) True G120993
TU153660 other upstream 135740 11667755 ~ 11685089 (-) False AMCG00002327
TU153720 other upstream 199602 11731617 ~ 11734324 (-) True G122597
TU153763 other upstream 316455 11848470 ~ 11854891 (-) True AMCG00002350
TU153773 other upstream 339847 11871862 ~ 11872862 (-) False AMCG00002351
TU153859 other upstream 463813 11995828 ~ 12006351 (-) True AMCG00002368

Expression Profile