RNA id: AMCG00002326


Basic Information

Item Value
RNA id AMCG00002326
length 775
RNA type mRNA
GC content 0.59
exon number 2
gene id AMCG00002326
representative True

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 11629149 ~ 11630909 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

TTAAGAGGAGATGTGTGGGGTGGAGGAAGCCCAGTTCAGTCTGTGCTgcggagggagaggagaagagaacTGAGGAGAGGCGCGAAAAGGCGAGGCGAGGCGGTGAGACGAGGACAGGACAGGATAGGGCAGTGTGTTTCGCTGCCCTCTGCTCTGATCAGTGACCTGCAGTCTCAGCGCCAAACCAGAGAGACAGCATGCAGCCCGTGCAGGAACGCAGATCGCAGGCCACAGGCCGGTTGCAGCCCCAGTCTGTGGCCCCGAGGAGGAGCGTCCCCCACTGCCTTGGCCCCCACCCTGTGTTCCTAGTGGGGTGCCCAGGCTCCGGTGCTGTGCTGATGCCTGACCACcgcatccctctccctcctgcaAGGCCTACCCAGAGGCCCCCCCCCACCTGCCTGCCCCACCACACCTTCATGCTGATTGATGGCTCCACCATGCAGCTGTCTCCAAGGAGCGTCACCAAAGAGAAGGGCTGCCAGCCACCACCCCAACAGGTGGCACATCCAGCCAATCGGGGGCCGGGTAGCACGGTGGCAGCCAATCAGCTGGCAAAGGCCTGTCTGCTGGGTGGGAAGAAGCTGGTGAAGTTCCTGCTCAGGGTCCTTCAGGGGCAGAAGCAGGGTGACAGGAAGTGAGGGACTCAGAAACTGGGGTGACTGGATGGGGCTTCTGCTTGTAGTGTGGCAATAGATTACCTTGGTTTTCctcttgtttttccagtttatttttgttctaaAACATTGTCTTTTTGATTTCTTCCCTTGTTACT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU153646 lncRNA downstream 714 11601972 ~ 11628435 (-) True G122530
TU153524 lncRNA downstream 179358 11449566 ~ 11449791 (-) True G122438
TU153515 lncRNA downstream 219563 11407524 ~ 11409586 (-) True G122432
TU153446 lncRNA downstream 354622 11267564 ~ 11274527 (-) True G122376
TU153396 lncRNA downstream 781948 10837804 ~ 10847201 (-) False AMCG00002301
TU153665 lncRNA upstream 83500 11714409 ~ 11716145 (-) True G122548
TU153668 lncRNA upstream 87621 11718530 ~ 11718969 (-) True G122551
TU153761 lncRNA upstream 213483 11844392 ~ 11845671 (-) True G122632
TU153762 lncRNA upstream 216172 11847081 ~ 11848192 (-) True G122633
TU153766 lncRNA upstream 226482 11857391 ~ 11859325 (-) True G122636
AMCG00002328 mRNA downstream 8490 11612396 ~ 11620659 (-) True AMCG00002328
AMCG00002320 mRNA downstream 82692 11542691 ~ 11546457 (-) True AMCG00002320
AMCG00002321 mRNA downstream 87870 11533550 ~ 11541279 (-) True AMCG00002321
AMCG00002322 mRNA downstream 97134 11531278 ~ 11532015 (-) True AMCG00002322
AMCG00002317 mRNA downstream 101231 11514000 ~ 11527918 (-) True AMCG00002317
AMCG00002327 mRNA upstream 17002 11647911 ~ 11680183 (-) True AMCG00002327
AMCG00002333 mRNA upstream 63428 11694337 ~ 11700677 (-) True AMCG00002333
AMCG00002334 mRNA upstream 72427 11703336 ~ 11705695 (-) True AMCG00002334
AMCG00002335 mRNA upstream 77349 11708258 ~ 11711311 (-) True AMCG00002335
AMCG00002336 mRNA upstream 89307 11720216 ~ 11725951 (-) True AMCG00002336
TU153575 other downstream 101794 11524893 ~ 11527355 (-) False AMCG00002317
TU153139 other downstream 1776074 9842095 ~ 9853075 (-) False AMCG00002279
TU153137 other downstream 1795925 9831911 ~ 9833224 (-) True AMCG00002276
TU152605 other downstream 3789738 7836495 ~ 7839411 (-) True AMCG00002223
TU151612 other downstream 7409272 4214715 ~ 4219877 (-) True G120993
TU153660 other upstream 36846 11667755 ~ 11685089 (-) False AMCG00002327
TU153720 other upstream 100708 11731617 ~ 11734324 (-) True G122597
TU153763 other upstream 217561 11848470 ~ 11854891 (-) True AMCG00002350
TU153773 other upstream 240953 11871862 ~ 11872862 (-) False AMCG00002351
TU153859 other upstream 364919 11995828 ~ 12006351 (-) True AMCG00002368

Expression Profile