RNA id: AMCG00002350


Basic Information

Item Value
RNA id AMCG00002350
length 303
RNA type mRNA
GC content 0.58
exon number 2
gene id AMCG00002350
representative False

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 11848470 ~ 11854891 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAATGCGCTACTGGACCGCTTTCACAATTACATCTTACCGCATCTGCGAGGGGAGGATCGCGTCTGTCACTGCAACTGTGGAAGGCACCATGTCCACTATGTGATCCCCTATGACGGAGATCAGTCTCTGGTCGACTCCTCTGAGAACTACTTTGTGAGCGACAGTGTGACGAAGCAGGAGTTGGACCTGATGCTGGGGCTGCTGCTTGGCTTCTGCTTCAGCTGGCTGCTGGTGTGGCTGGACGGGGCGCTGCACTGCGCTGTGAGGGCCTGGAGGGCCAGCCGCCGCTATGGTGAGTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU153762 lncRNA downstream 3325 11847081 ~ 11848192 (-) True G122633
TU153761 lncRNA downstream 5846 11844392 ~ 11845671 (-) True G122632
TU153668 lncRNA downstream 132548 11718530 ~ 11718969 (-) True G122551
TU153665 lncRNA downstream 135372 11714409 ~ 11716145 (-) True G122548
TU153646 lncRNA downstream 223082 11601972 ~ 11628435 (-) True G122530
TU153766 lncRNA upstream 3766 11857391 ~ 11859325 (-) True G122636
TU153748 lncRNA upstream 9278 11862903 ~ 11864056 (-) True G122621
TU153768 lncRNA upstream 15982 11869607 ~ 11871379 (-) True AMCG00002351
TU153878 lncRNA upstream 189690 12043315 ~ 12045019 (-) True G122726
TU153975 lncRNA upstream 342295 12195920 ~ 12243914 (-) False G122801
AMCG00002349 mRNA downstream 17694 11830472 ~ 11833823 (-) True AMCG00002349
AMCG00002347 mRNA downstream 30086 11815327 ~ 11821431 (-) True AMCG00002347
AMCG00002352 mRNA downstream 45878 11804054 ~ 11805639 (-) True AMCG00002352
AMCG00002346 mRNA downstream 47773 11800441 ~ 11803744 (-) True AMCG00002346
AMCG00002348 mRNA downstream 60781 11787502 ~ 11790736 (-) True AMCG00002348
AMCG00002345 mRNA upstream 10989 11864614 ~ 11869352 (-) True AMCG00002345
AMCG00002351 mRNA upstream 17479 11871104 ~ 11872276 (-) False AMCG00002351
AMCG00002357 mRNA upstream 28448 11882073 ~ 11892699 (-) True AMCG00002357
AMCG00002358 mRNA upstream 52285 11905910 ~ 11913015 (-) True AMCG00002358
AMCG00002359 mRNA upstream 59485 11913110 ~ 11918100 (-) True AMCG00002359
TU153720 other downstream 117193 11731617 ~ 11734324 (-) True G122597
TU153660 other downstream 166428 11667755 ~ 11685089 (-) False AMCG00002327
TU153575 other downstream 324162 11524893 ~ 11527355 (-) False AMCG00002317
TU153139 other downstream 1998442 9842095 ~ 9853075 (-) False AMCG00002279
TU153137 other downstream 2018293 9831911 ~ 9833224 (-) True AMCG00002276
TU153773 other upstream 18237 11871862 ~ 11872862 (-) False AMCG00002351
TU153859 other upstream 142203 11995828 ~ 12006351 (-) True AMCG00002368
TU154046 other upstream 1174572 13028197 ~ 13029406 (-) False G122862
TU154047 other upstream 1174572 13028197 ~ 13029406 (-) True G122862
TU154299 other upstream 1795603 13649228 ~ 13654236 (-) False AMCG00002421

Expression Profile