Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00002354 |
| length | 558 |
| RNA type | mRNA |
| GC content | 0.65 |
| exon number | 3 |
| gene id | AMCG00002354 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 11904873 ~ 11905805 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0060876 | semicircular canal formation | biological_process |
| id | description |
|---|---|
| K19558 | NBL1; neuroblastoma suppressor of tumorigenicity 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU153790 | lncRNA | upstream | 6190 | 11894628 ~ 11898683 (+) | True | AMCG00002355 |
| TU153714 | lncRNA | upstream | 47547 | 11856478 ~ 11857326 (+) | True | G122592 |
| TU153666 | lncRNA | upstream | 188172 | 11716355 ~ 11716701 (+) | True | G122549 |
| TU153621 | lncRNA | upstream | 192786 | 11710450 ~ 11712087 (+) | False | AMCG00002339 |
| TU153607 | lncRNA | upstream | 218555 | 11685432 ~ 11686318 (+) | True | G122501 |
| TU153860 | lncRNA | downstream | 106192 | 12011997 ~ 12016084 (+) | False | AMCG00002360 |
| TU153898 | lncRNA | downstream | 198865 | 12104670 ~ 12105523 (+) | True | G122737 |
| TU153905 | lncRNA | downstream | 222575 | 12128380 ~ 12129678 (+) | True | G122743 |
| TU153906 | lncRNA | downstream | 224073 | 12129878 ~ 12130747 (+) | True | G122744 |
| TU154008 | lncRNA | downstream | 466996 | 12372801 ~ 12373031 (+) | True | G122829 |
| AMCG00002355 | mRNA | upstream | 6172 | 11894473 ~ 11898701 (+) | False | AMCG00002355 |
| AMCG00002344 | mRNA | upstream | 59854 | 11837860 ~ 11845019 (+) | True | AMCG00002344 |
| AMCG00002342 | mRNA | upstream | 91233 | 11805698 ~ 11813640 (+) | True | AMCG00002342 |
| AMCG00002341 | mRNA | upstream | 104366 | 11798284 ~ 11800507 (+) | True | AMCG00002341 |
| AMCG00002340 | mRNA | upstream | 107139 | 11793620 ~ 11797734 (+) | True | AMCG00002340 |
| AMCG00002353 | mRNA | downstream | 13861 | 11919666 ~ 11922866 (+) | True | AMCG00002353 |
| AMCG00002356 | mRNA | downstream | 27820 | 11933625 ~ 11959805 (+) | True | AMCG00002356 |
| AMCG00002362 | mRNA | downstream | 61570 | 11967375 ~ 11983436 (+) | True | AMCG00002362 |
| AMCG00002364 | mRNA | downstream | 85152 | 11990957 ~ 11992957 (+) | True | AMCG00002364 |
| AMCG00002360 | mRNA | downstream | 106166 | 12011971 ~ 12016053 (+) | True | AMCG00002360 |
| TU153704 | other | upstream | 68704 | 11835439 ~ 11836169 (+) | True | G122582 |
| TU153608 | other | upstream | 210708 | 11688600 ~ 11694165 (+) | True | AMCG00002331 |
| TU153583 | other | upstream | 273981 | 11629012 ~ 11630892 (+) | True | G122482 |
| TU153483 | other | upstream | 527135 | 11376940 ~ 11377738 (+) | False | AMCG00002311 |
| TU153306 | other | upstream | 1310569 | 10567912 ~ 10594304 (+) | False | AMCG00002294 |
| TU153909 | other | downstream | 227981 | 12133786 ~ 12140465 (+) | True | G122746 |
| TU154058 | other | downstream | 1152268 | 13058073 ~ 13061685 (+) | False | AMCG00002388 |
| TU154081 | other | downstream | 1219573 | 13125378 ~ 13129697 (+) | True | AMCG00002393 |
| TU154987 | other | downstream | 5052356 | 16958161 ~ 16960082 (+) | True | AMCG00002500 |
| TU155222 | other | downstream | 6009631 | 17915436 ~ 17984730 (+) | True | G123807 |
