RNA id: AMCG00002355



Basic Information


Item Value
RNA id AMCG00002355
length 463
RNA type mRNA
GC content 0.58
exon number 4
gene id AMCG00002355
representative False

Chromosome Information


Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 11894473 ~ 11898701 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCTGTATCGTACACCACCATGTGAAATCGCGGCCCTGCTGAACAGCCTCTCTCCCCGATTCGCCCTCCTCCGCGGTTGCGCAATCTTTATTTACTGTTCGGGACGGACGTTGTTCTCGGTTCTCGCGAGAACTCCTCATTTCCTTTCTCTGCAAGAGTCCGCCAGCGAATTCTCGCGGTACTTGCTGTGGAAAATGTCCGAAAGAGAGCTGGGGAGGAAGTGGGACCGCTGCCTTGCGGACAGCGCTGTCAAGCTCGgggccGGCCTCGGGTTGGGAATTGTGTTCTCGGTTATCTTCTTCAAGCgtAGGGCATGGCCGGTAGCATTTGGTGCCGGGGGGGGTCTTGGCATGGCATACTCTAACTGCCAGCATGACTTCCAGCAGCCATACCTGCTGCATGGGCGCTATGTCAAGTCGTCCTGCTGGTGTGGTGTCAGAGCCAGAAACAGCACCTGCAACCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU153714 lncRNA upstream 37147 11856478 ~ 11857326 (+) True G122592
TU153666 lncRNA upstream 177772 11716355 ~ 11716701 (+) True G122549
TU153621 lncRNA upstream 182386 11710450 ~ 11712087 (+) False AMCG00002339
TU153607 lncRNA upstream 208155 11685432 ~ 11686318 (+) True G122501
TU153579 lncRNA upstream 350852 11543104 ~ 11543621 (+) True G122478
TU153860 lncRNA downstream 113296 12011997 ~ 12016084 (+) False AMCG00002360
TU153898 lncRNA downstream 205969 12104670 ~ 12105523 (+) True G122737
TU153905 lncRNA downstream 229679 12128380 ~ 12129678 (+) True G122743
TU153906 lncRNA downstream 231177 12129878 ~ 12130747 (+) True G122744
TU154008 lncRNA downstream 474100 12372801 ~ 12373031 (+) True G122829
AMCG00002344 mRNA upstream 49454 11837860 ~ 11845019 (+) True AMCG00002344
AMCG00002342 mRNA upstream 80833 11805698 ~ 11813640 (+) True AMCG00002342
AMCG00002341 mRNA upstream 93966 11798284 ~ 11800507 (+) True AMCG00002341
AMCG00002340 mRNA upstream 96739 11793620 ~ 11797734 (+) True AMCG00002340
AMCG00002343 mRNA upstream 101603 11791414 ~ 11792870 (+) True AMCG00002343
AMCG00002354 mRNA downstream 6172 11904873 ~ 11905805 (+) True AMCG00002354
AMCG00002353 mRNA downstream 20965 11919666 ~ 11922866 (+) True AMCG00002353
AMCG00002356 mRNA downstream 34924 11933625 ~ 11959805 (+) True AMCG00002356
AMCG00002362 mRNA downstream 68674 11967375 ~ 11983436 (+) True AMCG00002362
AMCG00002364 mRNA downstream 92256 11990957 ~ 11992957 (+) True AMCG00002364
TU153704 other upstream 58304 11835439 ~ 11836169 (+) True G122582
TU153608 other upstream 200308 11688600 ~ 11694165 (+) True AMCG00002331
TU153583 other upstream 263581 11629012 ~ 11630892 (+) True G122482
TU153483 other upstream 516735 11376940 ~ 11377738 (+) False AMCG00002311
TU153306 other upstream 1300169 10567912 ~ 10594304 (+) False AMCG00002294
TU153909 other downstream 235085 12133786 ~ 12140465 (+) True G122746
TU154058 other downstream 1159372 13058073 ~ 13061685 (+) False AMCG00002388
TU154081 other downstream 1226677 13125378 ~ 13129697 (+) True AMCG00002393
TU154987 other downstream 5059460 16958161 ~ 16960082 (+) True AMCG00002500
TU155222 other downstream 6016735 17915436 ~ 17984730 (+) True G123807

Expression Profile