RNA id: AMCG00002436


Basic Information

Item Value
RNA id AMCG00002436
length 1344
RNA type mRNA
GC content 0.60
exon number 9
gene id AMCG00002436
representative True

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 14070785 ~ 14101399 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAGAAGACAGGAACCGGGACCGCAGGCCGGCCATGAGTGTGGCGACAACGTGGACCTTGTGAACGGCCAACCCACCGGCTCGGTGCGGATCTCCTTCGGCTACATGTCCACTTTCCAGGACTGCCAGACCTTCCTGAAGTTCGTTGTCGACTCCTTCGTCCAGGGGCCGGTCAGAGTAGACGAGGAGAGGCTGGCGAGCCTGAGAGCAGGGCCGCCTGTGGGGGAGACAGCCCACCGCCCCCCAGCTCCCTGCTGCAACGGTCTGCCTGAGGCAAAGATGGACACAGAGGGTTCAGGTGGGGTTGGGAAGACCCCCAGCGACTGTGTCAGGGAGGAGAGAGTCCCGACTGCAGCAGCCAAAGCCCTGAAGAGTGAGGACGTCTCTGCAACTCTCACCAATATCTTCCTGTATCCCATTAAGTCCTGTGCAGCAGTAGAGGTGAGGGAGTGGCCGCTGGGGCAGAGCGGGCTGCTGTACGACCGCTCCTGGATGGTGGTGAACGTGAATGGCGTGTGTCTGAGCCAGAAGCAGGAGCCGCGGCTGTGCCTCATCCGCCCACATGTCAGCTTGCAGAGGAGCGAGCTGTCTGTGAGCGCAGAAGGAATGGACACTATATCTATTCCACTTGAAGGTGGCCCTGGGGAGCAGCAGACACAGCAGGTGTGTCAGAGCAAAGTCTGTGGAGACAGGGTGCAGACGCTGGATTGTGGAGAGGAGGTGTCAGCGTGGCTCTCCGAGTTCCTGGGGAAACAGTGCCGGCTCATCAGACAGAGATCCCAATCCAGGAGAGACATGAGGAAAGGCCGCTTGCAAGGTGAGCAACGcgcctctctgtctctggtgAACGAGGCCCCGTACCTGATGATTAACAGAGCCAGTCTCCAGCTCGTCCAGGACCACATTGCCAACAGAGTTGACTCTGGTGTGTGTCAGCAGTTCAGCACTGAGCAGTTGATTGACCGTTTCCGTGCCAACCTTGTTGTCAGTGGAGCGCAGCCCTTTGAGGAAGACGATTGGACACGGCTGATGATAGGCCACACCCCTTTCCAGGTTGTGGGCCGCTGTGGTCGGTGTCAAATGATCGGGATAGACCAGGAAACAGGAGCGAGAAGCCGGGAGCCCCTGCAGTCTCTCTCCGCCTGCCGGGATGGGAAGCCGAAGATTGCCGATCAGGCGCTCGGCTGCTCGGGCGCCATCGGGAATCGGCGCTCGGGTGCCGTCGGGAATCCGGAGGCGAGGCGGAGATCGGGAGTAGCGAGAGAAGGAGCAAAGGGGGCAGAGCACGGCACACGCTTCCTGGTCCTCCTGTCCTCACCGACACCTGTCTTTGTTTGGGTCTGA

Function

GO: NA

KEGG:

id description
K15631 ABA3; molybdenum cofactor sulfurtransferase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU154255 lncRNA downstream 579168 13487114 ~ 13491617 (-) True G123027
TU154235 lncRNA downstream 613726 13455085 ~ 13457059 (-) True G123014
TU154199 lncRNA downstream 658489 13411499 ~ 13412296 (-) True G122991
TU154158 lncRNA downstream 765190 13303152 ~ 13305595 (-) True G122957
TU154157 lncRNA downstream 767703 13302120 ~ 13303082 (-) True G122956
TU154433 lncRNA upstream 441422 14542821 ~ 14543020 (-) True G123175
TU154435 lncRNA upstream 464848 14566247 ~ 14567067 (-) True G123177
TU154436 lncRNA upstream 485815 14587214 ~ 14588758 (-) True G123178
TU154437 lncRNA upstream 487410 14588809 ~ 14594542 (-) True G123179
TU154473 lncRNA upstream 590571 14691970 ~ 14692999 (-) True G123204
AMCG00002434 mRNA downstream 26881 13990906 ~ 14043904 (-) True AMCG00002434
AMCG00002433 mRNA downstream 104318 13966110 ~ 13966467 (-) True AMCG00002433
AMCG00002432 mRNA downstream 131524 13885177 ~ 13939261 (-) True AMCG00002432
AMCG00002430 mRNA downstream 277595 13788543 ~ 13793190 (-) True AMCG00002430
AMCG00002431 mRNA downstream 298476 13768415 ~ 13772309 (-) True AMCG00002431
AMCG00002435 mRNA upstream 26405 14127804 ~ 14151845 (-) True AMCG00002435
AMCG00002438 mRNA upstream 263656 14365055 ~ 14369820 (-) True AMCG00002438
AMCG00002445 mRNA upstream 578985 14680384 ~ 14682429 (-) True AMCG00002445
AMCG00002448 mRNA upstream 594999 14696398 ~ 14731127 (-) True AMCG00002448
AMCG00002447 mRNA upstream 660438 14761837 ~ 14787948 (-) True AMCG00002447
TU154299 other downstream 416549 13649228 ~ 13654236 (-) False AMCG00002421
TU154046 other downstream 1041379 13028197 ~ 13029406 (-) False G122862
TU154047 other downstream 1041379 13028197 ~ 13029406 (-) True G122862
TU153859 other downstream 2064434 11995828 ~ 12006351 (-) True AMCG00002368
TU153773 other downstream 2197923 11871862 ~ 11872862 (-) False AMCG00002351
TU154543 other upstream 839861 14941260 ~ 14946311 (-) True G123263
TU154950 other upstream 2734757 16836156 ~ 16839722 (-) True G123585
TU155250 other upstream 3821053 17922452 ~ 17989465 (-) True G123829
TU156333 other upstream 8984595 23085994 ~ 23153164 (-) True G124719
TU156342 other upstream 9080522 23181921 ~ 23185168 (-) True AMCG00002629

Expression Profile