RNA id: AMCG00002514


Basic Information

Item Value
RNA id AMCG00002514
length 291
RNA type mRNA
GC content 0.49
exon number 2
gene id AMCG00002514
representative True

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 17183401 ~ 17185908 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAGTGAGCTCATCAGCACAACCACGGGCAAAGCAAAGCTGAAGAAAGCCATCCAGGATTTGCGCTACATCGGGAAAGGAACTTACACGGACTGTGCAATCACTGTGGCAACCGGGCAACTGATGTCAGGTAGCTCTCCTTTCCACGGCAATAAATACATGGTTGTGGTGACAGACGGACATCCATTCGATGGCTACAAAGAGCCGTGTGGGGGGATCAACTATGCAGTCAGCGAAGCTAAAGGGatggaaattaaaatctttGGTGTTGCTATTACCCCTGATCATCTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU155036 lncRNA downstream 107852 17075312 ~ 17075549 (-) True G123646
TU155030 lncRNA downstream 133345 16995129 ~ 17050056 (-) True G123642
TU155025 lncRNA downstream 200755 16980831 ~ 16982646 (-) True G123637
TU154999 lncRNA downstream 223294 16958162 ~ 16960107 (-) False AMCG00002503
TU154878 lncRNA downstream 528538 16653499 ~ 16654863 (-) True G123527
TU155101 lncRNA upstream 48462 17234370 ~ 17238544 (-) True G123705
TU155202 lncRNA upstream 474159 17660067 ~ 17675110 (-) True G123788
TU155213 lncRNA upstream 504130 17690038 ~ 17696504 (-) False AMCG00002524
TU155242 lncRNA upstream 625610 17811518 ~ 17815466 (-) True G123824
TU155254 lncRNA upstream 747556 17933464 ~ 17994763 (-) True AMCG00002533
AMCG00002510 mRNA downstream 25378 17137176 ~ 17158023 (-) True AMCG00002510
AMCG00002509 mRNA downstream 86318 17092906 ~ 17097083 (-) True AMCG00002509
AMCG00002508 mRNA downstream 93087 17080504 ~ 17090314 (-) True AMCG00002508
AMCG00002504 mRNA downstream 111476 17063407 ~ 17071925 (-) True AMCG00002504
AMCG00002505 mRNA downstream 130595 17021419 ~ 17052806 (-) True AMCG00002505
AMCG00002516 mRNA upstream 121358 17307266 ~ 17308556 (-) True AMCG00002516
AMCG00002515 mRNA upstream 168742 17354650 ~ 17371962 (-) True AMCG00002515
AMCG00002518 mRNA upstream 230229 17416137 ~ 17423894 (-) True AMCG00002518
AMCG00002519 mRNA upstream 333097 17519005 ~ 17530234 (-) True AMCG00002519
AMCG00002522 mRNA upstream 358932 17544840 ~ 17553514 (-) True AMCG00002522
TU154950 other downstream 343679 16836156 ~ 16839722 (-) True G123585
TU154543 other downstream 2237090 14941260 ~ 14946311 (-) True G123263
TU154299 other downstream 3529165 13649228 ~ 13654236 (-) False AMCG00002421
TU154046 other downstream 4153995 13028197 ~ 13029406 (-) False G122862
TU155250 other upstream 736544 17922452 ~ 17989465 (-) True G123829
TU156333 other upstream 5900086 23085994 ~ 23153164 (-) True G124719
TU156342 other upstream 5996013 23181921 ~ 23185168 (-) True AMCG00002629
TU156457 other upstream 7075657 24261565 ~ 24261823 (-) True G124829
TU156479 other upstream 7105879 24291787 ~ 24339566 (-) True G124848

Expression Profile