RNA id: AMCG00002531


Basic Information

Item Value
RNA id AMCG00002531
length 1026
RNA type mRNA
GC content 0.52
exon number 9
gene id AMCG00002531
representative True

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 17876005 ~ 17902810 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gaggagaagaaagaacaCCCTGGAGAATGCTGGGCCGTTCCCGCAGCCGCCTACACTGTGCTAATGAGGTGCCTTCGGGAAGGGGAAGAGCCCACTGTCAATCACATGGCAGCAAAGATTGTGGAGAACGTCTGCACCACGGTCTCCTATCACTCGCAGGGCTTCCTCACTGCAGAGATTGGGCCCATGCTCTGGTATCTGTTCACTCACTCCACTGTGGATTCCTTGAGGGTCACTGCCATATCGGCGCTCTGCAGAATCACACGGCACTACGCCAGCGCCTTCCACAACGTGATTGACCAGGTGGGCTTGCCCGCCATCCTCAACAGCCTGGTGTGCGGAATAAGCCGCGTTCAGCAGCACATGCTCACCATGTTCTCCGCAGTGCTGGCGTCTGGGGTCCACTTGCAGAAACTGGTTCAGGAGAAGGACTTTGTTACAAAAATCGTCCGTCTGTTAGAGAGCCCCTCGCCAGCTATCCGGGCAAAGGCCTTCCTGGTGCTGCTACAGGTCATAATGAACAGCAGGGAGATGCTCCTCTTGTGCTGTAATTCCAGACTGGTGATGTACATTGAAAGAGACAGCAGAAAGGCTACGCCAGAGAAGGAACAACAAAGCAGCAATGAATACCTGTCAAACTGCCTGGACCTACTCATCCGTCACATTGTGCAGGAGCTGCCAGCAATCCTAGGCCGTAAACATCCATCAGCAGTCCAAGCAAAACAGCTGAAGCAGAGTCTTCCCATGATGGCTGTAGTGCTTCATCTTCTGACATCGCAGATATTTAGGCCCCAAGTGGTGACAGATGAGTTTCTCCTCAACTTTGGAGTGCTATTGAATCATATCAGATCTGTAGATTCTTGTGTGACCAGTTTGGAGAATGCAGTAGCCGAATGGCGAGTCTTCAGCTTACGGTTGCTGTCAGAAATCACACTGCTGCTGGTGAACCACGAGGCCGTGGAAAAGGGCAAGACGCTCGGTTCAAACAACAAACTTCTGTCTCTCATTAGAGAGTCCCTGCTTCCA

Function

GO: NA

KEGG:

id description
K17545 ULK4; serine/threonine-protein kinase ULK4

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU155242 lncRNA downstream 60539 17811518 ~ 17815466 (-) True G123824
TU155213 lncRNA downstream 179501 17690038 ~ 17696504 (-) False AMCG00002524
TU155202 lncRNA downstream 200895 17660067 ~ 17675110 (-) True G123788
TU155101 lncRNA downstream 637461 17234370 ~ 17238544 (-) True G123705
TU155036 lncRNA downstream 800456 17075312 ~ 17075549 (-) True G123646
TU155254 lncRNA upstream 30654 17933464 ~ 17994763 (-) True AMCG00002533
TU155273 lncRNA upstream 148287 18051097 ~ 18052332 (-) True G123845
TU155304 lncRNA upstream 302858 18205668 ~ 18206132 (-) True G123876
TU155370 lncRNA upstream 566424 18469234 ~ 18469607 (-) True G123926
TU155412 lncRNA upstream 681899 18584709 ~ 18585930 (-) True G123961
AMCG00002530 mRNA downstream 18937 17838579 ~ 17857068 (-) True AMCG00002530
AMCG00002524 mRNA downstream 169716 17690008 ~ 17706289 (-) True AMCG00002524
AMCG00002523 mRNA downstream 190708 17678022 ~ 17685297 (-) True AMCG00002523
AMCG00002520 mRNA downstream 269056 17598649 ~ 17606949 (-) True AMCG00002520
AMCG00002521 mRNA downstream 303016 17558828 ~ 17572989 (-) True AMCG00002521
AMCG00002533 mRNA upstream 89251 17992061 ~ 18041573 (-) False AMCG00002533
AMCG00002532 mRNA upstream 155722 18058532 ~ 18062065 (-) True AMCG00002532
AMCG00002536 mRNA upstream 269321 18172131 ~ 18182627 (-) True AMCG00002536
AMCG00002539 mRNA upstream 300567 18203377 ~ 18204483 (-) True AMCG00002539
AMCG00002537 mRNA upstream 312985 18215795 ~ 18224850 (-) True AMCG00002537
TU154950 other downstream 1036283 16836156 ~ 16839722 (-) True G123585
TU154543 other downstream 2929694 14941260 ~ 14946311 (-) True G123263
TU154299 other downstream 4221769 13649228 ~ 13654236 (-) False AMCG00002421
TU154046 other downstream 4846599 13028197 ~ 13029406 (-) False G122862
TU155250 other upstream 19642 17922452 ~ 17989465 (-) True G123829
TU156333 other upstream 5183184 23085994 ~ 23153164 (-) True G124719
TU156342 other upstream 5279111 23181921 ~ 23185168 (-) True AMCG00002629
TU156457 other upstream 6358755 24261565 ~ 24261823 (-) True G124829
TU156479 other upstream 6388977 24291787 ~ 24339566 (-) True G124848

Expression Profile