RNA id: AMCG00002557



Basic Information


Item Value
RNA id AMCG00002557
length 306
RNA type mRNA
GC content 0.51
exon number 3
gene id AMCG00002557
representative True

Chromosome Information


Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 18786120 ~ 18786641 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAATCTGTCTAAAACACCTTCAGTGGTGAGTGTCGGCACACCTGACATTGAAACTCCTGAATGGATCCTGCATGCTGGCTACAGAGGAGTCCCTGCCACGGTCTGGTCTTTGGGAGTTCTCCTGTTTGATATCACTTGTGGAGAACTTCCATTTAAGACAGAAGAAGAGATCATAAACGGTGTGCTGGACTTCCCAGCAAATGTCTCCTCTGATTGCCAAAACCTGATCCGCAGCTGCCTGGCTCACTGCCCAGAGGATCGCCCATCACTGAAGCAGATTCTGCGCCACCGGTGGATGCAGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU155446 lncRNA downstream 3754 18782145 ~ 18782366 (-) True G123981
TU155412 lncRNA downstream 200190 18584709 ~ 18585930 (-) True G123961
TU155370 lncRNA downstream 316513 18469234 ~ 18469607 (-) True G123926
TU155304 lncRNA downstream 579988 18205668 ~ 18206132 (-) True G123876
TU155273 lncRNA downstream 733788 18051097 ~ 18052332 (-) True G123845
TU155557 lncRNA upstream 497237 19283878 ~ 19284293 (-) True G124068
TU155687 lncRNA upstream 1515431 20302072 ~ 20334454 (-) True G124175
TU155736 lncRNA upstream 1753666 20540307 ~ 20540523 (-) True G124222
TU155844 lncRNA upstream 2192456 20979097 ~ 21116735 (-) True G124327
TU155898 lncRNA upstream 2860414 21647055 ~ 21678545 (-) True AMCG00002584
AMCG00002551 mRNA downstream 26534 18723397 ~ 18759586 (-) True AMCG00002551
AMCG00002548 mRNA downstream 73029 18701895 ~ 18713091 (-) True AMCG00002548
AMCG00002552 mRNA downstream 153290 18629649 ~ 18632830 (-) True AMCG00002552
AMCG00002547 mRNA downstream 184012 18586078 ~ 18602108 (-) True AMCG00002547
AMCG00002550 mRNA downstream 213138 18554798 ~ 18572982 (-) True AMCG00002550
AMCG00002556 mRNA upstream 32 18786673 ~ 18786954 (-) True AMCG00002556
AMCG00002555 mRNA upstream 84722 18871363 ~ 18895560 (-) True AMCG00002555
AMCG00002554 mRNA upstream 113632 18900273 ~ 18978957 (-) True AMCG00002554
AMCG00002560 mRNA upstream 346554 19133195 ~ 19160336 (-) True AMCG00002560
AMCG00002559 mRNA upstream 384878 19171519 ~ 19174613 (-) True AMCG00002559
TU155250 other downstream 796655 17922452 ~ 17989465 (-) True G123829
TU154950 other downstream 1946398 16836156 ~ 16839722 (-) True G123585
TU154543 other downstream 3839809 14941260 ~ 14946311 (-) True G123263
TU154299 other downstream 5131884 13649228 ~ 13654236 (-) False AMCG00002421
TU154047 other downstream 5756714 13028197 ~ 13029406 (-) True G122862
TU156333 other upstream 4299353 23085994 ~ 23153164 (-) True G124719
TU156342 other upstream 4395280 23181921 ~ 23185168 (-) True AMCG00002629
TU156457 other upstream 5474924 24261565 ~ 24261823 (-) True G124829
TU156479 other upstream 5505146 24291787 ~ 24339566 (-) True G124848
TU156949 other upstream 7517241 26303882 ~ 26305923 (-) False AMCG00002688