Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00002564 |
| length | 1290 |
| RNA type | mRNA |
| GC content | 0.36 |
| exon number | 4 |
| gene id | AMCG00002564 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 19407058 ~ 19410399 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0007507 | heart development | biological_process |
| GO:0006357 | regulation of transcription by RNA polymerase II | biological_process |
| GO:0016055 | Wnt signaling pathway | biological_process |
| GO:0016592 | mediator complex | cellular_component |
| id | description |
|---|---|
| K15151 | MED10, NUT2; mediator of RNA polymerase II transcription subunit 10 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU155588 | lncRNA | upstream | 12334 | 19391123 ~ 19394724 (+) | True | G124094 |
| TU155559 | lncRNA | upstream | 22824 | 19333799 ~ 19384234 (+) | True | G124070 |
| TU155556 | lncRNA | upstream | 122781 | 19283878 ~ 19284277 (+) | True | G124067 |
| TU155524 | lncRNA | upstream | 319903 | 19086135 ~ 19087155 (+) | False | AMCG00002562 |
| TU155521 | lncRNA | upstream | 323255 | 19082663 ~ 19083803 (+) | False | AMCG00002562 |
| TU155657 | lncRNA | downstream | 751148 | 20161547 ~ 20161753 (+) | True | G124150 |
| TU155676 | lncRNA | downstream | 830186 | 20240585 ~ 20240879 (+) | True | G124165 |
| TU155690 | lncRNA | downstream | 948924 | 20359323 ~ 20359695 (+) | True | G124178 |
| TU155746 | lncRNA | downstream | 1151223 | 20561622 ~ 20562263 (+) | True | G124232 |
| TU155851 | lncRNA | downstream | 1714616 | 21125015 ~ 21170354 (+) | True | G124331 |
| AMCG00002565 | mRNA | upstream | 21757 | 19367316 ~ 19385301 (+) | True | AMCG00002565 |
| AMCG00002561 | mRNA | upstream | 273491 | 19130067 ~ 19133567 (+) | True | AMCG00002561 |
| AMCG00002562 | mRNA | upstream | 279111 | 19073693 ~ 19127947 (+) | True | AMCG00002562 |
| AMCG00002553 | mRNA | upstream | 596679 | 18799860 ~ 18810379 (+) | True | AMCG00002553 |
| AMCG00002546 | mRNA | upstream | 948268 | 18457051 ~ 18458790 (+) | True | AMCG00002546 |
| AMCG00002571 | mRNA | downstream | 619759 | 20030158 ~ 20033860 (+) | True | AMCG00002571 |
| AMCG00002572 | mRNA | downstream | 819328 | 20229727 ~ 20238940 (+) | True | AMCG00002572 |
| AMCG00002573 | mRNA | downstream | 831449 | 20241848 ~ 20333030 (+) | False | AMCG00002573 |
| AMCG00002574 | mRNA | downstream | 960144 | 20370543 ~ 20396006 (+) | True | AMCG00002574 |
| AMCG00002575 | mRNA | downstream | 1001437 | 20411836 ~ 20426798 (+) | True | AMCG00002575 |
| TU155541 | other | upstream | 274700 | 19130403 ~ 19132358 (+) | False | AMCG00002561 |
| TU155458 | other | upstream | 568527 | 18832014 ~ 18838531 (+) | True | G123989 |
| TU155222 | other | upstream | 1422328 | 17915436 ~ 17984730 (+) | True | G123807 |
| TU154987 | other | upstream | 2446976 | 16958161 ~ 16960082 (+) | True | AMCG00002500 |
| TU154081 | other | upstream | 6277361 | 13125378 ~ 13129697 (+) | True | AMCG00002393 |
| TU155679 | other | downstream | 863690 | 20274089 ~ 20276255 (+) | True | AMCG00002573 |
| TU156269 | other | downstream | 3657725 | 23068124 ~ 23180043 (+) | True | AMCG00002623 |
| TU156281 | other | downstream | 3742249 | 23152648 ~ 23290535 (+) | True | G124689 |
| TU156391 | other | downstream | 4267536 | 23677935 ~ 23681385 (+) | True | G124769 |
| TU156498 | other | downstream | 5011853 | 24422252 ~ 24422613 (+) | True | G124863 |
