Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00002575 |
| length | 1128 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 11 |
| gene id | AMCG00002575 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 20411836 ~ 20426798 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006836 | neurotransmitter transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005328 | neurotransmitter | molecular_function |
| id | description |
|---|---|
| K05036 | SLC6A3, DAT; solute carrier family 6 (neurotransmitter transporter, dopamine) member 3 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU155690 | lncRNA | upstream | 52141 | 20359323 ~ 20359695 (+) | True | G124178 |
| TU155676 | lncRNA | upstream | 170957 | 20240585 ~ 20240879 (+) | True | G124165 |
| TU155657 | lncRNA | upstream | 250083 | 20161547 ~ 20161753 (+) | True | G124150 |
| TU155588 | lncRNA | upstream | 1017112 | 19391123 ~ 19394724 (+) | True | G124094 |
| TU155559 | lncRNA | upstream | 1027602 | 19333799 ~ 19384234 (+) | True | G124070 |
| TU155746 | lncRNA | downstream | 134824 | 20561622 ~ 20562263 (+) | True | G124232 |
| TU155851 | lncRNA | downstream | 698217 | 21125015 ~ 21170354 (+) | True | G124331 |
| TU155889 | lncRNA | downstream | 1226984 | 21653782 ~ 21654725 (+) | True | G124364 |
| TU155936 | lncRNA | downstream | 1368196 | 21794994 ~ 21795202 (+) | True | G124403 |
| TU155939 | lncRNA | downstream | 1368517 | 21795315 ~ 21795957 (+) | True | G124405 |
| AMCG00002574 | mRNA | upstream | 15830 | 20370543 ~ 20396006 (+) | True | AMCG00002574 |
| AMCG00002573 | mRNA | upstream | 78806 | 20241848 ~ 20333030 (+) | False | AMCG00002573 |
| AMCG00002572 | mRNA | upstream | 172896 | 20229727 ~ 20238940 (+) | True | AMCG00002572 |
| AMCG00002571 | mRNA | upstream | 377976 | 20030158 ~ 20033860 (+) | True | AMCG00002571 |
| AMCG00002564 | mRNA | upstream | 1001437 | 19407058 ~ 19410399 (+) | True | AMCG00002564 |
| AMCG00002576 | mRNA | downstream | 30945 | 20457743 ~ 20463329 (+) | True | AMCG00002576 |
| AMCG00002577 | mRNA | downstream | 260552 | 20687350 ~ 20868956 (+) | True | AMCG00002577 |
| AMCG00002581 | mRNA | downstream | 595138 | 21021936 ~ 21054156 (+) | True | AMCG00002581 |
| AMCG00002582 | mRNA | downstream | 627708 | 21054506 ~ 21070496 (+) | True | AMCG00002582 |
| AMCG00002587 | mRNA | downstream | 1248273 | 21675071 ~ 21693525 (+) | True | AMCG00002587 |
| TU155679 | other | upstream | 135581 | 20274089 ~ 20276255 (+) | True | AMCG00002573 |
| TU155541 | other | upstream | 1279478 | 19130403 ~ 19132358 (+) | False | AMCG00002561 |
| TU155458 | other | upstream | 1573305 | 18832014 ~ 18838531 (+) | True | G123989 |
| TU155222 | other | upstream | 2427106 | 17915436 ~ 17984730 (+) | True | G123807 |
| TU154987 | other | upstream | 3451754 | 16958161 ~ 16960082 (+) | True | AMCG00002500 |
| TU156269 | other | downstream | 2641326 | 23068124 ~ 23180043 (+) | True | AMCG00002623 |
| TU156281 | other | downstream | 2725850 | 23152648 ~ 23290535 (+) | True | G124689 |
| TU156391 | other | downstream | 3251137 | 23677935 ~ 23681385 (+) | True | G124769 |
| TU156498 | other | downstream | 3995454 | 24422252 ~ 24422613 (+) | True | G124863 |
| TU156924 | other | downstream | 5848793 | 26275591 ~ 26278973 (+) | False | AMCG00002684 |
