Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00002623 |
| length | 900 |
| RNA type | mRNA |
| GC content | 0.56 |
| exon number | 6 |
| gene id | AMCG00002623 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 23068124 ~ 23180043 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004506 | squalene monooxygenase activity | molecular_function |
| GO:0050660 | flavin adenine dinucleotide binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU156249 | lncRNA | upstream | 56633 | 23011435 ~ 23012000 (+) | True | G124668 |
| TU156248 | lncRNA | upstream | 65381 | 23002991 ~ 23003252 (+) | True | G124667 |
| TU156247 | lncRNA | upstream | 66401 | 23001788 ~ 23002232 (+) | True | G124666 |
| TU156237 | lncRNA | upstream | 76873 | 22990571 ~ 22991760 (+) | True | G124658 |
| TU156236 | lncRNA | upstream | 78535 | 22987545 ~ 22990098 (+) | False | AMCG00002622 |
| TU156273 | lncRNA | downstream | 144632 | 23218330 ~ 23276775 (+) | True | G124687 |
| TU156357 | lncRNA | downstream | 348275 | 23421973 ~ 23436320 (+) | True | G124740 |
| TU156369 | lncRNA | downstream | 532839 | 23606537 ~ 23606839 (+) | True | G124750 |
| TU156392 | lncRNA | downstream | 608315 | 23682013 ~ 23682226 (+) | True | G124770 |
| TU156396 | lncRNA | downstream | 755972 | 23829670 ~ 23829984 (+) | True | G124774 |
| AMCG00002620 | mRNA | upstream | 833 | 23056782 ~ 23067800 (+) | True | AMCG00002620 |
| AMCG00002624 | mRNA | upstream | 12917 | 23043824 ~ 23055716 (+) | True | AMCG00002624 |
| AMCG00002619 | mRNA | upstream | 35048 | 23028636 ~ 23033585 (+) | True | AMCG00002619 |
| AMCG00002621 | mRNA | upstream | 69148 | 22996873 ~ 22999485 (+) | True | AMCG00002621 |
| AMCG00002622 | mRNA | upstream | 78469 | 22987622 ~ 22990164 (+) | False | AMCG00002622 |
| AMCG00002630 | mRNA | downstream | 333868 | 23407566 ~ 23407966 (+) | True | AMCG00002630 |
| AMCG00002631 | mRNA | downstream | 579274 | 23652972 ~ 23677437 (+) | True | AMCG00002631 |
| AMCG00002635 | mRNA | downstream | 893880 | 23967578 ~ 23985386 (+) | True | AMCG00002635 |
| AMCG00002637 | mRNA | downstream | 923549 | 23997247 ~ 24007711 (+) | True | AMCG00002637 |
| AMCG00002636 | mRNA | downstream | 945806 | 24019504 ~ 24036531 (+) | True | AMCG00002636 |
| TU155679 | other | upstream | 2792378 | 20274089 ~ 20276255 (+) | True | AMCG00002573 |
| TU155541 | other | upstream | 3936275 | 19130403 ~ 19132358 (+) | False | AMCG00002561 |
| TU155458 | other | upstream | 4230102 | 18832014 ~ 18838531 (+) | True | G123989 |
| TU155222 | other | upstream | 5083903 | 17915436 ~ 17984730 (+) | True | G123807 |
| TU154987 | other | upstream | 6108551 | 16958161 ~ 16960082 (+) | True | AMCG00002500 |
| TU156281 | other | downstream | 78950 | 23152648 ~ 23290535 (+) | True | G124689 |
| TU156391 | other | downstream | 604237 | 23677935 ~ 23681385 (+) | True | G124769 |
| TU156498 | other | downstream | 1348554 | 24422252 ~ 24422613 (+) | True | G124863 |
| TU156924 | other | downstream | 3201893 | 26275591 ~ 26278973 (+) | False | AMCG00002684 |
| TU156956 | other | downstream | 3288514 | 26362212 ~ 26369525 (+) | True | G125219 |
