RNA id: AMCG00002634


Basic Information

Item Value
RNA id AMCG00002634
length 273
RNA type mRNA
GC content 0.49
exon number 2
gene id AMCG00002634
representative True

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 23777689 ~ 23787869 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CCGTTAGAAGATGCCTTGGAAGATGAGGAGGAAGAGTGTCTCTCTGAGGAGAATGACATCATCGCAAAAGAGGAGTTCTCAGCGGAGGAGAACTTCTCCACAGACTTTGAACCAGAAAACTTGAGCTGTGAAGACATGGAATACTTCTGCAACAAAGGTGAAGAGGAAGGCAGTCAAGAGACCATGGAGTCAGACGGAGACGGGCAAAGTGAGAAGACCAGGCCACCCCGGTTAGAAACAGAAGATTGGGATGGACCAGGTAGGCTAACACCT

Function

GO:

id name namespace
GO:0005515 protein binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU156386 lncRNA downstream 114117 23655984 ~ 23663572 (-) True G124765
TU156319 lncRNA downstream 481574 23138618 ~ 23296115 (-) False G124719
TU156251 lncRNA downstream 778581 22996819 ~ 22999108 (-) True G124669
TU156157 lncRNA downstream 1123970 22653482 ~ 22653719 (-) True G124591
TU156148 lncRNA downstream 1179134 22597999 ~ 22598555 (-) True G124582
TU156401 lncRNA upstream 85809 23873678 ~ 23928150 (-) True G124779
TU156515 lncRNA upstream 623160 24411029 ~ 24411336 (-) True G124873
TU156550 lncRNA upstream 788296 24576165 ~ 24577131 (-) True G124907
TU156640 lncRNA upstream 1160281 24948150 ~ 24948841 (-) False G124975
TU156641 lncRNA upstream 1160281 24948150 ~ 24950358 (-) True G124975
AMCG00002633 mRNA downstream 95095 23677942 ~ 23682594 (-) True AMCG00002633
AMCG00002632 mRNA downstream 306143 23421798 ~ 23471546 (-) True AMCG00002632
AMCG00002629 mRNA downstream 585033 23181931 ~ 23192656 (-) False AMCG00002629
AMCG00002625 mRNA downstream 740830 23033808 ~ 23036859 (-) True AMCG00002625
AMCG00002626 mRNA downstream 749342 23018946 ~ 23028347 (-) True AMCG00002626
AMCG00002638 mRNA upstream 252472 24040341 ~ 24045879 (-) True AMCG00002638
AMCG00002639 mRNA upstream 263750 24051619 ~ 24065028 (-) True AMCG00002639
AMCG00002640 mRNA upstream 352691 24140560 ~ 24183507 (-) True AMCG00002640
AMCG00002641 mRNA upstream 407852 24195721 ~ 24211357 (-) True AMCG00002641
AMCG00002644 mRNA upstream 561011 24348880 ~ 24369782 (-) True AMCG00002644
TU156342 other downstream 592521 23181921 ~ 23185168 (-) True AMCG00002629
TU156333 other downstream 624525 23085994 ~ 23153164 (-) True G124719
TU155250 other downstream 5788224 17922452 ~ 17989465 (-) True G123829
TU154950 other downstream 6937967 16836156 ~ 16839722 (-) True G123585
TU154543 other downstream 8831378 14941260 ~ 14946311 (-) True G123263
TU156457 other upstream 473696 24261565 ~ 24261823 (-) True G124829
TU156479 other upstream 503918 24291787 ~ 24339566 (-) True G124848
TU156949 other upstream 2516013 26303882 ~ 26305923 (-) False AMCG00002688
TU157116 other upstream 3067024 26854893 ~ 26875246 (-) True AMCG00002705

Expression Profile