RNA id: AMCG00002652


Basic Information

Item Value
RNA id AMCG00002652
length 303
RNA type mRNA
GC content 0.49
exon number 3
gene id AMCG00002652
representative True

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 24811356 ~ 24834198 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGAGAAGTTCCTGGTTCAAGCACTGTGGTCAGTGTCCACATCCTGCCAGCGGGAGAGAAGCGAAGCTGTGTGCTGGCCTGTGTGGCTCCTGTCAAagtGCAAATTCCACTGCACCAATGGCAAGTGCTTGCATCTAGGCTCATTAATCTGCAATCAGCTGAATGACTGTGGGGATAACAGCGATGAGGAAAACTGCTCAATGGTAACGCAGCACCCGCCTCCTGGCATCTTCAACTCTAAAAACTGCTCCATTCTGAAAGTATTTGATAAATATGGGAAGCCAGATGCAAGTGAGTGCTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU156550 lncRNA downstream 234225 24576165 ~ 24577131 (-) True G124907
TU156515 lncRNA downstream 400020 24411029 ~ 24411336 (-) True G124873
TU156401 lncRNA downstream 883206 23873678 ~ 23928150 (-) True G124779
TU156386 lncRNA downstream 1147784 23655984 ~ 23663572 (-) True G124765
TU156319 lncRNA downstream 1515241 23138618 ~ 23296115 (-) False G124719
TU156640 lncRNA upstream 113952 24948150 ~ 24948841 (-) False G124975
TU156641 lncRNA upstream 113952 24948150 ~ 24950358 (-) True G124975
TU156720 lncRNA upstream 540682 25374880 ~ 25433728 (-) True G125036
TU156719 lncRNA upstream 583753 25417951 ~ 25433728 (-) False G125036
TU156721 lncRNA upstream 597443 25431641 ~ 25433728 (-) False G125036
AMCG00002651 mRNA downstream 24752 24776265 ~ 24786604 (-) True AMCG00002651
AMCG00002648 mRNA downstream 50471 24750209 ~ 24760885 (-) True AMCG00002648
AMCG00002647 mRNA downstream 123514 24686573 ~ 24687842 (-) True AMCG00002647
AMCG00002645 mRNA downstream 404376 24388134 ~ 24406980 (-) True AMCG00002645
AMCG00002643 mRNA downstream 424601 24377731 ~ 24386755 (-) True AMCG00002643
AMCG00002654 mRNA upstream 50788 24884986 ~ 24916583 (-) True AMCG00002654
AMCG00002655 mRNA upstream 86908 24921106 ~ 24933751 (-) True AMCG00002655
AMCG00002653 mRNA upstream 129597 24963795 ~ 24966409 (-) True AMCG00002653
AMCG00002660 mRNA upstream 465503 25299701 ~ 25334662 (-) True AMCG00002660
AMCG00002665 mRNA upstream 739635 25573833 ~ 25603050 (-) True AMCG00002665
TU156479 other downstream 471790 24291787 ~ 24339566 (-) True G124848
TU156457 other downstream 549533 24261565 ~ 24261823 (-) True G124829
TU156342 other downstream 1626188 23181921 ~ 23185168 (-) True AMCG00002629
TU156333 other downstream 1658192 23085994 ~ 23153164 (-) True G124719
TU155250 other downstream 6821891 17922452 ~ 17989465 (-) True G123829
TU156949 other upstream 1469684 26303882 ~ 26305923 (-) False AMCG00002688
TU157116 other upstream 2020695 26854893 ~ 26875246 (-) True AMCG00002705

Expression Profile