RNA id: AMCG00002666


Basic Information

Item Value
RNA id AMCG00002666
length 414
RNA type mRNA
GC content 0.54
exon number 3
gene id AMCG00002666
representative True

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 25604167 ~ 25611494 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

atGTACAAGGGTTACTCCACCTCCATTACTTATTCCAAGAAAACCAACCGTGGCAACACGGTCTTCTGGGAATCGTTCCCCCACAGAATTATCCTGAAGAGGGACTGGCCTCATCCCTCTGTTGCCTCCCCATCCTCTGCCATGTGTCCTCGTAAACAGAGAGGTGCTGAGGCCATGGGGAAGGGGAGGTTGCAGTCAGATGGAAAACTCACAGGGACATTCTGGCAGTGCAGCCCTGGAGAAGGCCAGGGACTTTCCTGTGGCCCTTGTGTCTCCATAGTCAATGCAGAGGTGGAGGAGAGATGGCTGGAGGAGAACTGTACACAGAATTATTCCCTCATTAACCCACAGAAGACCCAAATGGAGACCCTACAGCCTGGCCAGGGAAGTACCCCCAGCCCCACTAGCACGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU156717 lncRNA downstream 150169 25451215 ~ 25453998 (-) True G125035
TU156720 lncRNA downstream 170439 25374880 ~ 25433728 (-) True G125036
TU156719 lncRNA downstream 170439 25417951 ~ 25433728 (-) False G125036
TU156721 lncRNA downstream 170439 25431641 ~ 25433728 (-) False G125036
TU156641 lncRNA downstream 653809 24948150 ~ 24950358 (-) True G124975
TU156879 lncRNA upstream 515060 26126554 ~ 26130462 (-) True G125160
TU156899 lncRNA upstream 593398 26204892 ~ 26205871 (-) True G125178
TU156922 lncRNA upstream 630760 26242254 ~ 26242531 (-) True G125200
TU156942 lncRNA upstream 663975 26275469 ~ 26279621 (-) True AMCG00002682
TU157020 lncRNA upstream 884455 26495949 ~ 26498450 (-) True G125269
AMCG00002665 mRNA downstream 1117 25573833 ~ 25603050 (-) True AMCG00002665
AMCG00002660 mRNA downstream 269505 25299701 ~ 25334662 (-) True AMCG00002660
AMCG00002653 mRNA downstream 637758 24963795 ~ 24966409 (-) True AMCG00002653
AMCG00002655 mRNA downstream 670416 24921106 ~ 24933751 (-) True AMCG00002655
AMCG00002654 mRNA downstream 687584 24884986 ~ 24916583 (-) True AMCG00002654
AMCG00002671 mRNA upstream 36319 25647813 ~ 25676650 (-) True AMCG00002671
AMCG00002670 mRNA upstream 134589 25746083 ~ 25752614 (-) True AMCG00002670
AMCG00002674 mRNA upstream 176889 25788383 ~ 25822702 (-) True AMCG00002674
AMCG00002672 mRNA upstream 324708 25936202 ~ 25989563 (-) True AMCG00002672
AMCG00002673 mRNA upstream 391321 26002815 ~ 26005357 (-) True AMCG00002673
TU156479 other downstream 1264601 24291787 ~ 24339566 (-) True G124848
TU156457 other downstream 1342344 24261565 ~ 24261823 (-) True G124829
TU156342 other downstream 2418999 23181921 ~ 23185168 (-) True AMCG00002629
TU156333 other downstream 2451003 23085994 ~ 23153164 (-) True G124719
TU155250 other downstream 7614702 17922452 ~ 17989465 (-) True G123829
TU156949 other upstream 692388 26303882 ~ 26305923 (-) False AMCG00002688
TU157116 other upstream 1243399 26854893 ~ 26875246 (-) True AMCG00002705