RNA id: AMCG00002693


Basic Information

Item Value
RNA id AMCG00002693
length 1235
RNA type mRNA
GC content 0.45
exon number 10
gene id AMCG00002693
representative True

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 26596131 ~ 26608752 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTTTGCGGAATACGGCTGAGATGAAAGGACTTGTCGATGAACCAAACTACACTATTGACCTTTTGGAGGAAGGCACGATGCTTGGAGATGTCATTGATAACCATATTTATGAGCAGGCTCTGGCTGAaaagaatgcattttttgtggCCGACCTTGGGAACATAGTAAAGAAGCATTTTCAGTGGCAAAACATCATGGCACCAATCAAGCCCTTCTTTGCTGTGAAGTGTAACACAAGCCAGGCTGTCATTGAGATCCTGGCAGCCCTTGGGACTGGCTTTGCCTGTGCAAACAAgAGTGAAGTTGCTCTGGTACAGGGCTACGGCATTGCTCCAGAAAACATCCTCTATACTGGCATGTGTAAACAACTGTCCCACATGAAATATGCTGCTAAGAATGGCATTGATCTCCTTGCCCACAGCGAGGGAGAGGAGATGAGCATGGTTTTTGGCTCCACACTCAAGAACTGCAGGCACCTGCTGGAAAGTGCAAAGGAGATGGGTGTTGAAGTTGTGGGGAAACTATCTCCTTCCCCCAGATTCCATATTTCAAGCTCTTGCAAGGATCCACAGGCCTATGTTCATGCAATATCTGATGCTCGCTGTGTCTTTGACATGGGGGAGGAATTTGGCTTCAATATGAGCTTTCTGGATATTGGTGGTGGATTCTGTGGGTCCAGCATTCAGTTGGATGAGATATACAGCACAATCCGGCCACTTCTAGATGTCTATTTCCCAACGGACTCTGGAGTGCATGTTATTGCTGAGCCTGGAAGTTACTTTGTAACTACTTCTTTCAGTCTGGCAGTCAATATTATAGCCAAGAAAGTGGTTGCGAGGGATCAGGATGATCAGCCTCAGGAAATTAAACCATCTCTGAATGATGAGCCAGCGTTTATGTATTATATGAATGATGGGGTGTTTGGGTCTTTTGCCAACAAGTTACTGGAAAAAACTATTGCTGCCCCTTCTGTTCATAAGAAATTAAGTAAGGAAGAAGCAGTATTTGCCAGCAGCTTGTGGGGCCCCTCTTGTGATGGTCTGGATCAAGTTGTTGAACACTGCCTATTGCCTGAACTGAATGTTGGAGACTGGGTTGTTTTTAACAACATGGATATGTTTTATAATAGGTACGAGATGCAGGATGCTGGAATTACACTGGACACCACAATGAAGAATTTCTTACTGGTTCCATCTTGCTTTCAATTAAGTCATGAAGATATTTCCACCCCAGCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU157020 lncRNA downstream 97681 26495949 ~ 26498450 (-) True G125269
TU156942 lncRNA downstream 316510 26275469 ~ 26279621 (-) True AMCG00002682
TU156922 lncRNA downstream 353600 26242254 ~ 26242531 (-) True G125200
TU156899 lncRNA downstream 390260 26204892 ~ 26205871 (-) True G125178
TU156879 lncRNA downstream 465669 26126554 ~ 26130462 (-) True G125160
TU157043 lncRNA upstream 45458 26654210 ~ 26654689 (-) True AMCG00002694
TU157045 lncRNA upstream 46876 26655628 ~ 26655871 (-) True G125291
TU157051 lncRNA upstream 52952 26661704 ~ 26663029 (-) True G125297
TU157134 lncRNA upstream 304955 26913707 ~ 26915965 (-) True G125361
TU157152 lncRNA upstream 368932 26977684 ~ 26977920 (-) True G125376
AMCG00002686 mRNA downstream 143657 26395882 ~ 26452474 (-) True AMCG00002686
AMCG00002685 mRNA downstream 205149 26382511 ~ 26390982 (-) True AMCG00002685
AMCG00002690 mRNA downstream 220235 26363962 ~ 26375896 (-) True AMCG00002690
AMCG00002687 mRNA downstream 257974 26322898 ~ 26338157 (-) True AMCG00002687
AMCG00002689 mRNA downstream 276755 26318343 ~ 26319376 (-) True AMCG00002689
AMCG00002694 mRNA upstream 4724 26613476 ~ 26664767 (-) False AMCG00002694
AMCG00002708 mRNA upstream 213213 26821965 ~ 26831030 (-) True AMCG00002708
AMCG00002705 mRNA upstream 248617 26857369 ~ 26875008 (-) False AMCG00002705
AMCG00002707 mRNA upstream 455009 27063761 ~ 27099867 (-) True AMCG00002707
AMCG00002704 mRNA upstream 505453 27114205 ~ 27119264 (-) True AMCG00002704
TU156949 other downstream 290208 26303882 ~ 26305923 (-) False AMCG00002688
TU156479 other downstream 2256565 24291787 ~ 24339566 (-) True G124848
TU156457 other downstream 2334308 24261565 ~ 24261823 (-) True G124829
TU156342 other downstream 3410963 23181921 ~ 23185168 (-) True AMCG00002629
TU156333 other downstream 3442967 23085994 ~ 23153164 (-) True G124719
TU157116 other upstream 246141 26854893 ~ 26875246 (-) True AMCG00002705

Expression Profile